ENST00000616939.4 GPN1

Information
Transcript ID
ENST00000616939.4
Genome
hg19
Position
chr2:27,851,863-27,873,711
Strand
+
CDS length
1,167
Amino acid length
389
Gene symbol
GPN1
Gene type
protein-coding
Gene description
GPN-loop GTPase 1
Gene Entrez Gene ID
11321
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 27,851,863 27,852,036
2 27,852,726 27,852,819
3 27,853,894 27,853,933
4 27,854,701 27,854,767
5 27,855,500 27,855,537
6 27,857,713 27,857,791
7 27,858,007 27,858,101
8 27,861,077 27,861,122
9 27,861,752 27,861,898
10 27,862,910 27,862,992
11 27,864,107 27,864,146
12 27,865,296 27,865,386
13 27,870,703 27,870,810
14 27,872,982 27,873,711
CDS
Exon number Type Start Stop
1 CDS 27,851,884 27,852,036
2 CDS 27,852,726 27,852,819
3 CDS 27,853,894 27,853,933
4 CDS 27,854,701 27,854,767
5 CDS 27,855,500 27,855,537
6 CDS 27,857,713 27,857,791
7 CDS 27,858,007 27,858,101
8 CDS 27,861,077 27,861,122
9 CDS 27,861,752 27,861,898
10 CDS 27,862,910 27,862,992
11 CDS 27,864,107 27,864,146
12 CDS 27,865,296 27,865,386
13 CDS 27,870,703 27,870,810
14 CDS 27,872,982 27,873,067
Other genome
Genome Chromosome Start End Links
hg38 chr2 27,628,996 27,650,844 Link
CDS sequence
ATGCGGTGTCTCTATGGTCGGGTGGGTGGGGCCAGGAGGAAGATGGCGGCGTCCGCAGCTGCCGCTGAGCTCCAGGCTTCTGGGGGTCCGCGGCACCCAGTGTGTCTGTTGGTGTTGGGAATGGCGGGATCCGGGAAAACCACTTTTGTACAGAGGCTCACAGGACACCTGCATGCCCAAGGCACTCCACCGTATGTGATCAACCTGGATCCAGCAGTACATGAAGTTCCCTTTCCTGCCAATATTGATATTCGTGATACTGTAAAGTATAAAGAAGTAATGAAACAATATGGACTTGGACCCAATGGCGGCATAGTGACCTCACTCAATCTCTTTGCTACCAGATTTGATCAGGTGATGAAATTTATTGAGAAGGCCCAGAACATGTCCAAATATGTGTTGATTGACACACCTGGACAGATTGAGGTATTCACCTGGTCAGCTTCTGGGACAATTATCACTGAAGCCCTTGCATCCTCATTTCCAACAGTTGTCATCTATGTAATGGACACATCGAGAAGTACCAACCCAGTGACCTTCATGTCCAACATGCTCTATGCCTGCAGCATCTTATACAAAACCAAGCTGCCTTTCATTGTGGTCATGAATAAAACTGACATCATTGACCACAGCTTTGCAGTGGAATGGATGCAGGATTTTGAGGCTTTCCAAGATGCCTTGAATCAAGAGACTACATACGTCAGTAACCTGACTCGTTCAATGAGCCTGGTGTTAGATGAGTTTTACAGCTCACTCAGGGTGGTGGGTGTCTCTGCTGTTCTGGGTACTGGATTAGATGAACTCTTTGTGCAAGTTACCAGTGCTGCCGAAGAATATGAAAGGGAGTATCGTCCTGAATATGAACGTCTGAAAAAATCACTGGCCAACGCAGAGAGCCAACAGCAGAGAGAACAACTGGAACGCCTTCGAAAAGATATGGGTTCTGTAGCCTTGGATGCAGGGACTGCCAAAGACAGCTTATCTCCTGTGCTGCACCCTTCTGATTTGATCCTGACTCGAGGAACCTTGGATGAAGAGGATGAGGAAGCAGACAGCGATACTGATGACATTGACCACAGAGTTACAGAGGAAAGCCATGAAGAGCCAGCATTCCAGAATTTTATGCAAGAATCGATGGCACAATACTGGAAGAGAAACAATAAATAG
Amino sequence
MRCLYGRVGGARRKMAASAAAAELQASGGPRHPVCLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK*