ENST00000458167.6 GPN1

Information
Transcript ID
ENST00000458167.6
Genome
hg19
Position
chr2:27,851,515-27,873,711
Strand
+
CDS length
840
Amino acid length
280
Gene symbol
GPN1
Gene type
protein-coding
Gene description
GPN-loop GTPase 1
Gene Entrez Gene ID
11321
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 27,851,515 27,851,581
2 27,852,726 27,852,819
3 27,855,500 27,855,537
4 27,857,713 27,857,791
5 27,858,007 27,858,101
6 27,861,077 27,861,122
7 27,861,752 27,861,898
8 27,862,910 27,862,992
9 27,864,107 27,864,146
10 27,865,296 27,865,386
11 27,870,703 27,870,810
12 27,872,982 27,873,711
CDS
Exon number Type Start Stop
2 CDS 27,852,793 27,852,819
3 CDS 27,855,500 27,855,537
4 CDS 27,857,713 27,857,791
5 CDS 27,858,007 27,858,101
6 CDS 27,861,077 27,861,122
7 CDS 27,861,752 27,861,898
8 CDS 27,862,910 27,862,992
9 CDS 27,864,107 27,864,146
10 CDS 27,865,296 27,865,386
11 CDS 27,870,703 27,870,810
12 CDS 27,872,982 27,873,067
Other genome
Genome Chromosome Start End Links
hg38 chr2 27,628,648 27,650,844 Link
CDS sequence
ATGAAGTTCCCTTTCCTGCCAATATTGGTGATGAAATTTATTGAGAAGGCCCAGAACATGTCCAAATATGTGTTGATTGACACACCTGGACAGATTGAGGTATTCACCTGGTCAGCTTCTGGGACAATTATCACTGAAGCCCTTGCATCCTCATTTCCAACAGTTGTCATCTATGTAATGGACACATCGAGAAGTACCAACCCAGTGACCTTCATGTCCAACATGCTCTATGCCTGCAGCATCTTATACAAAACCAAGCTGCCTTTCATTGTGGTCATGAATAAAACTGACATCATTGACCACAGCTTTGCAGTGGAATGGATGCAGGATTTTGAGGCTTTCCAAGATGCCTTGAATCAAGAGACTACATACGTCAGTAACCTGACTCGTTCAATGAGCCTGGTGTTAGATGAGTTTTACAGCTCACTCAGGGTGGTGGGTGTCTCTGCTGTTCTGGGTACTGGATTAGATGAACTCTTTGTGCAAGTTACCAGTGCTGCCGAAGAATATGAAAGGGAGTATCGTCCTGAATATGAACGTCTGAAAAAATCACTGGCCAACGCAGAGAGCCAACAGCAGAGAGAACAACTGGAACGCCTTCGAAAAGATATGGGTTCTGTAGCCTTGGATGCAGGGACTGCCAAAGACAGCTTATCTCCTGTGCTGCACCCTTCTGATTTGATCCTGACTCGAGGAACCTTGGATGAAGAGGATGAGGAAGCAGACAGCGATACTGATGACATTGACCACAGAGTTACAGAGGAAAGCCATGAAGAGCCAGCATTCCAGAATTTTATGCAAGAATCGATGGCACAATACTGGAAGAGAAACAATAAATAG
Amino sequence
MKFPFLPILVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK*