ENST00000313984.3 B3GALNT2
Information
- Transcript ID
- ENST00000313984.3
- Genome
- hg19
- Position
- chr1:235,628,213-235,667,722
- Strand
- -
- CDS length
- 981
- Amino acid length
- 327
- Gene symbol
- B3GALNT2
- Gene type
- protein-coding
- Gene description
- beta-1,3-N-acetylgalactosaminyltransferase 2
- Gene Entrez Gene ID
- 148789
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 235,628,213 | 235,629,031 |
| 7 | 235,634,164 | 235,634,274 |
| 6 | 235,643,370 | 235,643,465 |
| 5 | 235,647,638 | 235,647,831 |
| 4 | 235,652,473 | 235,652,573 |
| 3 | 235,657,991 | 235,658,138 |
| 2 | 235,659,496 | 235,659,618 |
| 1 | 235,667,441 | 235,667,722 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | UTR | 235,628,213 | 235,628,935 |
| 8 | CDS | 235,628,936 | 235,629,031 |
| 7 | CDS | 235,634,164 | 235,634,274 |
| 6 | CDS | 235,643,370 | 235,643,465 |
| 5 | CDS | 235,647,638 | 235,647,831 |
| 4 | CDS | 235,652,473 | 235,652,573 |
| 3 | CDS | 235,657,991 | 235,658,138 |
| 2 | CDS | 235,659,496 | 235,659,618 |
| 1 | CDS | 235,667,441 | 235,667,552 |
| 1 | UTR | 235,667,553 | 235,667,722 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 235,464,896 | 235,504,422 | Link |
CDS sequence
ATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTGCACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGCGCCTCCGGGGCCGGCCCTGCAGGTGGAGTCTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGGCTCACCCCAACCTCCACCTCCCGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATAACAGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACTCACTATGATGTGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATGAGACATTTGCTACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAAGATCCTTATTCCTGTAAACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTGGGTTTCCAGAGGAACATCACTGTCAAACTTTATCAGGCAGAACAAGAGGAGGCCCTCTTCATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAGGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATTCATCTTACCAGAGAGCTTTGAAGGTACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAGTGACAGTGAATGATGGAGGGGGAGTTCTCAGAGTCATTACAGCTGGGGAGGGTGCATTGCCTCATGAATTCTTGGAAGGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCTAGTTGA
Amino sequence
MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPAGGVSLLLPRLECNGAVSAHPNLHLPGSRDSPASASQVAGITDQLALFPQWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQGKFAS*