ENST00000366600.3 B3GALNT2

Information
Transcript ID
ENST00000366600.3
Genome
hg19
Position
chr1:235,613,238-235,667,781
Strand
-
CDS length
1,503
Amino acid length
501
Gene symbol
B3GALNT2
Gene type
protein-coding
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 2
Gene Entrez Gene ID
148789
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 235,613,238 235,613,655
11 235,616,402 235,616,458
10 235,617,468 235,617,627
9 235,618,871 235,618,996
8 235,621,911 235,622,094
7 235,628,953 235,629,031
6 235,634,164 235,634,274
5 235,643,370 235,643,465
4 235,647,638 235,647,831
3 235,652,473 235,652,573
2 235,657,991 235,658,138
1 235,667,441 235,667,781
CDS
Exon number Type Start Stop
12 UTR 235,613,238 235,613,520
12 CDS 235,613,521 235,613,655
11 CDS 235,616,402 235,616,458
10 CDS 235,617,468 235,617,627
9 CDS 235,618,871 235,618,996
8 CDS 235,621,911 235,622,094
7 CDS 235,628,953 235,629,031
6 CDS 235,634,164 235,634,274
5 CDS 235,643,370 235,643,465
4 CDS 235,647,638 235,647,831
3 CDS 235,652,473 235,652,573
2 CDS 235,657,991 235,658,138
1 CDS 235,667,441 235,667,552
1 UTR 235,667,553 235,667,781
CDS sequence
ATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTGCACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGCGCCTCCGGGGCCGGCCCTGCAGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACTCACTATGATGTGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATGAGACATTTGCTACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAAGATCCTTATTCCTGTAAACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTGGGTTTCCAGAGGAACATCACTGTCAAACTTTATCAGGCAGAACAAGAGGAGGCCCTCTTCATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAGGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATTCATCTTACCAGAGAGCTTTGAAGGTACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAGTGACAGTGAATGATGGAGGGGGAGTTCTCAGAGTCATTACAGCTGGGGAGGGTGCATTGCCTCATGAATTCTTGGAAGGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGAAGGTGATGCTCTCTTACACAACCTTCATTCTCGCCCTCAAAGACTTATTGATCATATAAGGAATCTCCATGAGGAAGATGCCTTACTGAAGGAGGAAAGCAGCATCTATGATGATATTGTTTTTGTGGATGTTGTCGACACTTATCGTAATGTTCCTGCAAAATTATTGAACTTCTATAGATGGACTGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGACAGATGATGACTGTTACATAGACCTCGAAGCTGTATTTAATAGGATTGTCCAAAAGAATCTGGATGGGCCTAATTTTTGGTGGGGAAATTTCAGACTGAATTGGGCAGTTGACCGAACCGGAAAGTGGCAGGAGTTGGAGTACCCGAGCCCCGCTTACCCTGCCTTTGCATGTGGGTCAGGATATGTGATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCAACTCGGGGAGGTTAAAGACCTATCAGGGTGAAGATGTAAGCATGGGCATCTGGATGGCTGCCATAGGACCTAAAAGATACCAGGACAGTCTGTGGCTGTGTGAGAAGACCTGTGAGACAGGAATGCTGTCTTCTCCTCAGTATTCTCCGTGGGAACTGACGGAACTGTGGAAACTGAAGGAACGGTGCGGTGATCCTTGTCGATGTCAAGCAAGATAA
Amino sequence
MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFPQWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR*