ENST00000272091.8 SDE2

Information
Transcript ID
ENST00000272091.8
Genome
hg19
Position
chr1:226,170,403-226,187,044
Strand
-
CDS length
1,356
Amino acid length
452
Gene symbol
SDE2
Gene type
protein-coding
Gene description
SDE2 telomere maintenance homolog
Gene Entrez Gene ID
163859
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 226,170,403 226,173,224
6 226,175,597 226,176,089
5 226,178,944 226,179,064
4 226,180,099 226,180,268
3 226,180,592 226,180,703
2 226,182,967 226,183,084
1 226,186,894 226,187,044
CDS
Exon number Type Start Stop
7 CDS 226,173,003 226,173,224
6 CDS 226,175,597 226,176,089
5 CDS 226,178,944 226,179,064
4 CDS 226,180,099 226,180,268
3 CDS 226,180,592 226,180,703
2 CDS 226,182,967 226,183,084
1 CDS 226,186,894 226,187,013
Other genome
Genome Chromosome Start End Links
hg38 chr1 225,982,702 225,999,343 Link
CDS sequence
ATGGCGGAGGCCGCGGCGCTGGTGTGGATTCGCGGCCCTGGCTTCGGGTGCAAGGCGGTGCGGTGTGCCTCGGGTCGGTGCACCGTCCGGGATTTTATCCACCGGCACTGCCAAGATCAGAATGTTCCAGTGGAAAACTTCTTTGTGAAATGCAATGGAGCACTCATTAACACCAGTGACACAGTGCAGCATGGAGCTGTTTATAGTTTGGAACCCAGACTTTGCGGTGGAAAAGGAGGTTTTGGATCTATGCTCCGAGCACTTGGTGCTCAGATTGAGAAGACAACCAATCGAGAAGCTTGTCGGGATCTCAGTGGAAGGAGACTACGCGATGTCAATCATGAAAAAGCAATGGCTGAATGGGTAAAACAACAAGCCGAGCGAGAGGCTGAAAAGGAGCAGAAGCGGCTGGAGCGACTGCAGCGGAAGCTTGTAGAACCCAAGCACTGCTTCACCAGCCCCGACTACCAGCAGCAGTGCCATGAGATGGCTGAGCGTCTGGAGGATTCCGTCCTCAAAGGTATGCAGGCTGCCTCCAGCAAGATGGTTTCAGCAGAAATCAGTGAGAATCGGAAACGGCAATGGCCTACTAAATCTCAAACAGACAGAGGAGCCAGTGCGGGAAAGAGGAGATGCTTCTGGTTGGGCATGGAGGGACTAGAGACTGCAGAAGGGTCCAACTCTGAGAGTTCAGATGATGACAGTGAAGAAGCACCAAGCACTTCAGGAATGGGTTTCCATGCTCCAAAAATTGGTAGCAATGGTGTCGAGATGGCAGCCAAATTTCCCAGTGGTTCTCAGAGGGCGAGAGTAGTGAATACAGACCATGGATCACCAGAACAACTGCAGATCCCGGTGACTGACTCTGGGAGGCATATTTTAGAAGACTCATGTGCTGAGCTGGGGGAGTCCAAAGAGCACATGGAAAGCAGGATGGTTACAGAAACAGAAGAGACCCAGGAGAAGAAGGCAGAGAGTAAAGAACCCATAGAAGAGGAGCCCACTGGGGCTGGACTGAATAAGGATAAAGAGACAGAAGAAAGGACTGATGGGGAAAGAGTTGCTGAGGTAGCACCTGAAGAAAGGGAAAACGTTGCCGTTGCCAAACTGCAGGAAAGCCAGCCAGGAAACGCAGTTATTGATAAGGAAACTATAGATTTATTGGCGTTCACCTCTGTTGCAGAACTGGAGTTGCTGGGTTTGGAGAAGCTCAAATGTGAACTGATGGCCCTTGGACTGAAATGTGGGGGCACTCTGCAGGAGCGGGCAGCAAGACTCTTCTCTGTCAGAGGACTGGCAAAGGAGCAAATTGACCCGGCTTTATTTGCCAAGCCTTTGAAAGGGAAGAAAAAATGA
Amino sequence
MAEAAALVWIRGPGFGCKAVRCASGRCTVRDFIHRHCQDQNVPVENFFVKCNGALINTSDTVQHGAVYSLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFAKPLKGKKK*