ENST00000643231.1 TSEN15
Information
- Transcript ID
- ENST00000643231.1
- Genome
- hg19
- Position
- chr1:184,020,820-184,066,619
- Strand
- +
- CDS length
- 468
- Amino acid length
- 156
- Gene symbol
- TSEN15
- Gene type
- protein-coding
- Gene description
- tRNA splicing endonuclease subunit 15
- Gene Entrez Gene ID
- 116461
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 184,020,820 | 184,021,024 |
| 2 | 184,023,488 | 184,023,569 |
| 3 | 184,023,862 | 184,023,997 |
| 4 | 184,064,824 | 184,066,619 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 184,020,890 | 184,021,024 |
| 2 | CDS | 184,023,488 | 184,023,569 |
| 3 | CDS | 184,023,862 | 184,023,997 |
| 4 | CDS | 184,064,824 | 184,064,938 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 184,051,686 | 184,097,485 | Link |
CDS sequence
ATGGAGGAGCGCGGCGATTCCGAGCCGACCCCCGGCTGCAGCGGCCTGGGTCCGGGCGGTGTTCGCGGCTTTGGCGACGGCGGTGGAGCTCCTTCGTGGGCCCCTGAGGACGCCTGGATGGGCACTCACCCTAAGTATCTAGAAATGATGGAATTAGATATAGGAGATGCCACCCAAGTTTATGTAGCGTTCTTGGTTTACCTGGACCTCATGGAAAGCAAAAGCTGGCATGAAGTAAACTGTGTAGGATTACCAGAACTCCAGCTCATCTGCCTTGTTGGTACTGAGATAGAAGGGGAGGGGTTACAGACTGTGGTGCCTACCCCCATCACTGCTTCCCTCAGCCATAACAGTTGTACACAGAAGAAAGCCCATATGAGGACACAGCAAGAAGGTGGCTGTCTTCAAGCCAAGAAGAGAGGCCTCATCAGAGATGGAATGTTCCTGCACTTCGGTCTGGATTTCTAG
Amino sequence
MEERGDSEPTPGCSGLGPGGVRGFGDGGGAPSWAPEDAWMGTHPKYLEMMELDIGDATQVYVAFLVYLDLMESKSWHEVNCVGLPELQLICLVGTEIEGEGLQTVVPTPITASLSHNSCTQKKAHMRTQQEGGCLQAKKRGLIRDGMFLHFGLDF*