ENST00000258301.6 STX6
Information
- Transcript ID
- ENST00000258301.6
- Genome
- hg19
- Position
- chr1:180,941,861-180,992,006
- Strand
- -
- CDS length
- 768
- Amino acid length
- 256
- Gene symbol
- STX6
- Gene type
- protein-coding
- Gene description
- syntaxin 6
- Gene Entrez Gene ID
- 10228
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 180,941,861 | 180,945,782 |
| 7 | 180,953,813 | 180,953,907 |
| 6 | 180,957,375 | 180,957,481 |
| 5 | 180,959,120 | 180,959,245 |
| 4 | 180,962,499 | 180,962,561 |
| 3 | 180,971,742 | 180,971,836 |
| 2 | 180,974,430 | 180,974,599 |
| 1 | 180,991,775 | 180,992,006 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 180,945,706 | 180,945,782 |
| 7 | CDS | 180,953,813 | 180,953,907 |
| 6 | CDS | 180,957,375 | 180,957,481 |
| 5 | CDS | 180,959,120 | 180,959,245 |
| 4 | CDS | 180,962,499 | 180,962,561 |
| 3 | CDS | 180,971,742 | 180,971,836 |
| 2 | CDS | 180,974,430 | 180,974,599 |
| 1 | CDS | 180,991,775 | 180,991,809 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 180,972,725 | 181,022,870 | Link |
CDS sequence
ATGTCCATGGAGGACCCCTTCTTTGTGGTGAAAGGAGAGGTACAGAAAGCAGTCAACACTGCCCAGGGATTGTTTCAGAGATGGACAGAGCTCCTCCAGGACCCCTCCACAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGAAATAACCTCCGGAGCATAGAGTGGGATCTAGAGGACCTTGATGAAACCATCAGCATAGTTGAAGCAAATCCTAGAAAATTTAACCTTGATGCAACTGAATTGAGTATAAGAAAAGCCTTCATTACAAGTACTCGGCAAGTTGTCAGGGACATGAAAGATCAGATGTCAACTTCATCTGTGCAGGCATTAGCTGAAAGAAAAAATAGACAGGCACTGCTGGGAGACAGTGGCAGCCAGAACTGGAGCACTGGAACAACAGATAAATATGGGCGTCTGGACCGAGAGCTCCAGAGAGCCAATTCTCATTTCATTGAGGAGCAGCAGGCACAGCAGCAGTTGATCGTGGAACAGCAGGATGAGCAGTTGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGAAGAACATGTCCCAGCGCATCGGAGGGGAGCTGGAGGAACAGGCAGTTATGTTGGAAGATTTCTCTCACGAATTGGAGAGCACTCAGTCCCGGCTGGACAATGTGATGAAGAAACTTGCAAAAGTATCTCATATGACCAGTGATCGGCGCCAATGGTGTGCCATAGCCATCCTCTTTGCAGTCCTGTTGGTTGTGCTCATCCTCTTCTTAGTGCTGTGA
Amino sequence
MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNRQALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAILFAVLLVVLILFLVL*