ENST00000537350.5 RCSD1
Information
- Transcript ID
- ENST00000537350.5
- Genome
- hg19
- Position
- chr1:167,599,330-167,675,485
- Strand
- +
- CDS length
- 1,161
- Amino acid length
- 387
- Gene symbol
- RCSD1
- Gene type
- protein-coding
- Gene description
- RCSD domain containing 1
- Gene Entrez Gene ID
- 92241
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 167,599,330 | 167,599,666 |
| 2 | 167,653,137 | 167,653,238 |
| 3 | 167,659,286 | 167,659,357 |
| 4 | 167,663,336 | 167,663,539 |
| 5 | 167,666,336 | 167,667,079 |
| 6 | 167,673,901 | 167,675,485 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 167,599,661 | 167,599,666 |
| 2 | CDS | 167,653,137 | 167,653,238 |
| 3 | CDS | 167,659,286 | 167,659,357 |
| 4 | CDS | 167,663,336 | 167,663,539 |
| 5 | CDS | 167,666,336 | 167,667,079 |
| 6 | CDS | 167,673,901 | 167,673,933 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 167,630,093 | 167,706,248 | Link |
CDS sequence
ATGGAGGAAAGACCGGCAGAGACCAATGCCAATGTGGACAACTCGGCGTCCCCCTCGGTGGCCCAGCTGGCCGGGCGGTTTAGGGAGCAGGCGGCTGCAGCCAAGGAGAAATCACCACCCAATGCGAGCCACCCTCCTAAATTCAAGGTCAAGAGCTCGCCTCTGATTGAGAAGCTTCAGGCCAATTTAACCTTTGACCCAGCTGCTCTACTGCCTGGGGCCTCACCCAAGAGTCCTGGACTCAAGGCTATGGTGTCGCCATTTCACAGCCCACCTTCTACCCCCAGCAGCCCTGGTGTGCGATCTAGGCCCAGCGAGGCAGAGGAGGTGCCTGTCAGCTTCGACCAGCCCCCTGAAGGCAGTCATCTGCCCTGTTACAACAAGGTGCGGACGAGGGGCTCAATAAAAAGGCGCCCTCCCTCCAGGCGATTCCGAAGGTCACAGTCAGACTGTGGAGAACTTGGAGATTTCAGGGCGGTGGAGTCATCTCAGCAGAACGGTGCTAAGGAAGAGGATGGGGATGAAGTGTTGCCATCCAAGAGCAAGGCCCCAGGATCCCCTTTGTCCAGTGAGGGAGCAGCGGGAGAGGGAGTGAGAACCCTGGGACCTGCTGAAAAGCCTCCTCTGAGGAGGTCACCCAGCAGGACAGAGAAGCAGGAGGAGGACAGGGCCACAGAGGAAGCCAAGAACGGTGAAAAGGCCAGGCGGAGTTCAGAGGAGGTGGACGGCCAGCACCCGGCCCAAGAGGAGGTCCCGGAATCGCCCCAGACCTCTGGCCCAGAGGCAGAAAATAGGTGTGGGAGCCCCAGGGAGGAAAAGCCAGCTGGAGAGGAAGCAGAGATGGAAAAGGCTACAGAGGTGAAGGGGGAGAGGGTGCAAAATGAAGAGGTGGGACCTGAACATGACAGCCAAGAAACAAAGAAGCTGGAGGAGGGAGCTGCAGTGAAGGAGACCCCCCACAGTCCCCCTGGAGGAGTGAAGGGCGGAGATGTCCCCAAGCAGGAAAAAGGCAAGGAAAAACAACAGGAGGGGGCAGTGCTCGAGCCAGGCTGCAGCCCCCAGACCGGCCCTGCCCAGCTGGAGACCAGCAGTGAGGTCCAGAGCGAGCCAGCAGTCCCCAAGCCGGAGGATGACACTCCTGTCCAGGACACTAAAATGTGA
Amino sequence
MEERPAETNANVDNSASPSVAQLAGRFREQAAAAKEKSPPNASHPPKFKVKSSPLIEKLQANLTFDPAALLPGASPKSPGLKAMVSPFHSPPSTPSSPGVRSRPSEAEEVPVSFDQPPEGSHLPCYNKVRTRGSIKRRPPSRRFRRSQSDCGELGDFRAVESSQQNGAKEEDGDEVLPSKSKAPGSPLSSEGAAGEGVRTLGPAEKPPLRRSPSRTEKQEEDRATEEAKNGEKARRSSEEVDGQHPAQEEVPESPQTSGPEAENRCGSPREEKPAGEEAEMEKATEVKGERVQNEEVGPEHDSQETKKLEEGAAVKETPHSPPGGVKGGDVPKQEKGKEKQQEGAVLEPGCSPQTGPAQLETSSEVQSEPAVPKPEDDTPVQDTKM*