ENST00000338353.4 FAM78B
Information
- Transcript ID
- ENST00000338353.4
- Genome
- hg19
- Position
- chr1:166,039,257-166,136,206
- Strand
- -
- CDS length
- 786
- Amino acid length
- 262
- Gene symbol
- FAM78B
- Gene type
- protein-coding
- Gene description
- family with sequence similarity 78 member B
- Gene Entrez Gene ID
- 149297
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 3 | 166,039,257 | 166,040,000 |
| 2 | 166,135,223 | 166,135,977 |
| 1 | 166,136,110 | 166,136,206 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 166,039,478 | 166,040,000 |
| 2 | CDS | 166,135,223 | 166,135,485 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 166,070,020 | 166,166,969 | Link |
CDS sequence
ATGGGCTGTATCCAAAGCATCACCTGCAAGGCGCGGATCCGGCGCGAGAACATCGTGGTGTACGATGTGTGCGCCACCATCGACCAGTGCCCCACGCGCATCGAGGAGACCTCGCCCATCGTCCTGCGCTACAAGACCCCCTACTTCAAAGCCTCCGCCCGCGTGGTCATGCCCCCCATCCCCCGCCACGAGACCTGGGTGGTGGGCTGGATTCAGGCGTGCAATCAGATGGAGTTCTTCAACACCTACAGCGACCTGGGCATGTCAAGCTGGGAACTGCCTGACTTGAGGGAAGGGAGAGTAAAAGCCATCAGTGACTCAGATGGGGTGAGCTACCCTTGGTACGGGAACACCACAGAAACTGTGACCCTGGTTGGCCCCACCAACAAGATCTCCAGGTTCTCCGTCAGCATGAATGACAACTTCTACCCCAGTGTGACATGGGCAGTGCCTGTGAGTGACAGCAATGTGCCACTGCTCACAAGAATCAAGAGAGACCAAAGTTTCACGACCTGGCTGGTGGCCATGAACACCACCACAAAGGAGAAGATCATTCTGCAGACCATCAAGTGGAGGATGAGGGTGGACATTGAAGTGGACCCTCTTCAGCTCTTGGGGCAGCGGGCCCGGCTGGTGGGCAGGACTCAGCAGGAGCAGCCCCGGATCCTGAGCCGGATGGAACCCATCCCCCCTAATGCACTAGTGAAACCCAATGCCAATGATGCCCAGGTCCTCATGTGGAGGCCCAAGCGGGGGCCACCTCTGGTTGTGATCCCTCCTAAGTAG
Amino sequence
MGCIQSITCKARIRRENIVVYDVCATIDQCPTRIEETSPIVLRYKTPYFKASARVVMPPIPRHETWVVGWIQACNQMEFFNTYSDLGMSSWELPDLREGRVKAISDSDGVSYPWYGNTTETVTLVGPTNKISRFSVSMNDNFYPSVTWAVPVSDSNVPLLTRIKRDQSFTTWLVAMNTTTKEKIILQTIKWRMRVDIEVDPLQLLGQRARLVGRTQQEQPRILSRMEPIPPNALVKPNANDAQVLMWRPKRGPPLVVIPPK*