ENST00000464492.5 APOA2
Information
- Transcript ID
- ENST00000464492.5
- Genome
- hg19
- Position
- chr1:161,192,106-161,193,405
- Strand
- -
- CDS length
- 402
- Amino acid length
- 134
- Gene symbol
- APOA2
- Gene type
- protein-coding
- Gene description
- apolipoprotein A2
- Gene Entrez Gene ID
- 336
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 161,192,106 | 161,192,312 |
| 3 | 161,192,708 | 161,192,840 |
| 2 | 161,193,140 | 161,193,215 |
| 1 | 161,193,292 | 161,193,405 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 161,192,195 | 161,192,312 |
| 3 | CDS | 161,192,708 | 161,192,840 |
| 2 | CDS | 161,193,140 | 161,193,215 |
| 1 | CDS | 161,193,292 | 161,193,366 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 161,222,316 | 161,223,615 | Link |
CDS sequence
ATGTGTGAGCAGCATCCAAAGAGGCCTGGGCTTCAGTTGTGGAGAGGGAGAGAGCCAGGTTGGAATGGGCAGCAGGCCGCCCTCCCCACTGTTACCAACATGAAGCTGCTCGCAGCAACTGTGCTACTCCTCACCATCTGCAGCCTTGAAGGAGCTTTGGTTCGGAGACAGGCAAAGGAGCCATGTGTGGAGAGCCTGGTTTCTCAGTACTTCCAGACCGTGACTGACTATGGCAAGGACCTGATGGAGAAGGTCAAGAGCCCAGAGCTTCAGGCCGAGGCCAAGTCTTACTTTGAAAAGTCAAAGGAGCAGCTGACACCCCTGATCAAGAAGGCTGGAACGGAACTGGTTAACTTCTTGAGCTATTTCGTGGAACTTGGAACACAGCCTGCCACCCAGTGA
Amino sequence
MCEQHPKRPGLQLWRGREPGWNGQQAALPTVTNMKLLAATVLLLTICSLEGALVRRQAKEPCVESLVSQYFQTVTDYGKDLMEKVKSPELQAEAKSYFEKSKEQLTPLIKKAGTELVNFLSYFVELGTQPATQ*