ENST00000369102.5 C1orf54
Information
- Transcript ID
- ENST00000369102.5
- Genome
- hg19
- Position
- chr1:150,240,600-150,253,327
- Strand
- +
- CDS length
- 396
- Amino acid length
- 132
- Gene symbol
- C1orf54
- Gene type
- protein-coding
- Gene description
- chromosome 1 open reading frame 54
- Gene Entrez Gene ID
- 79630
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 150,240,600 | 150,241,220 |
| 2 | 150,244,687 | 150,244,816 |
| 3 | 150,245,202 | 150,245,266 |
| 4 | 150,246,490 | 150,246,573 |
| 5 | 150,248,150 | 150,248,208 |
| 6 | 150,248,930 | 150,249,040 |
| 7 | 150,252,054 | 150,252,152 |
| 8 | 150,253,246 | 150,253,327 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 150,245,221 | 150,245,266 |
| 4 | CDS | 150,246,490 | 150,246,573 |
| 5 | CDS | 150,248,150 | 150,248,208 |
| 6 | CDS | 150,248,930 | 150,249,040 |
| 7 | CDS | 150,252,054 | 150,252,149 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 150,268,200 | 150,280,916 | Link |
CDS sequence
ATGGATGTCCTCTTTGTAGCCATCTTTGCTGTGCCACTTATCCTGGGACAAGAATATGAGGATGAAGAAAGACTGGGAGAGGATGAATATTATCAGGTGGTCTATTATTATACAGTCACCCCCAGTTATGATGACTTTAGTGCAGATTTCACCATTGATTACTCCATATTTGAGTCAGAGGACAGGCTGAACAGGTTGGATAAGGACATAACAGAAGCAATAGAGACTACCATTAGTCTTGAAACAGCACGTGCAGACCATCCGAAGCCTGTAACTGTGAAACCAGTAACAACGGAACCTAGTCCAGATCTGAACGATGCCGTGTCCAGTTTGCGAAGTCCTATTCCCCTCCTCCTGTCGTGTGCCTTTGTTCAGGTGGGGATGTATTTCATGTAG
Amino sequence
MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESEDRLNRLDKDITEAIETTISLETARADHPKPVTVKPVTTEPSPDLNDAVSSLRSPIPLLLSCAFVQVGMYFM*