ENST00000604000.4 LIX1L
Information
- Transcript ID
- ENST00000604000.4
- Genome
- hg19
- Position
- chr1:145,477,069-145,501,670
- Strand
- +
- CDS length
- 1,014
- Amino acid length
- 338
- Gene symbol
- LIX1L
- Gene type
- protein-coding
- Gene description
- limb and CNS expressed 1 like
- Gene Entrez Gene ID
- 128077
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 145,477,069 | 145,477,450 |
| 2 | 145,487,304 | 145,487,467 |
| 3 | 145,492,235 | 145,492,375 |
| 4 | 145,497,393 | 145,497,488 |
| 5 | 145,498,103 | 145,498,180 |
| 6 | 145,498,536 | 145,500,505 |
| 7 | 145,500,513 | 145,501,670 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 145,477,159 | 145,477,450 |
| 2 | CDS | 145,487,304 | 145,487,467 |
| 3 | CDS | 145,492,235 | 145,492,375 |
| 4 | CDS | 145,497,393 | 145,497,488 |
| 5 | CDS | 145,498,103 | 145,498,180 |
| 6 | CDS | 145,498,536 | 145,498,778 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 145,933,423 | 145,958,017 | Link |
CDS sequence
ATGGAGACTATGCGAGCGCAGCGGCTGCAGCCTGGTGTGGGCACCAGCGGGAGGGGCACTCTCCGAGCGCTGCGGCCCGGAGTGACTGGGGCCGCGGCTGCCACCGCCACACCCCCTGCGGGCCCCCCGCCTGCCCCGCCGCCTCCCGCACCGCCCCCGCCGCCGCTGCTCCTGTCTGGGGCCCCAGGACTACCCCTGCCCCCCGGCGCCGCCGGCAGCCCGGCAGTGCTGCGAGAGGCCGTGGAGGCCGTGGTGAGGAGCTTCGCCAAGCACACGCAGGGCTATGGCCGAGTGAATGTGGTGGAGGCACTTCAGGAATTCTGGCAGATGAAGCAGTCCCGTGGTGCTGACTTAAAGAATGGGGCTCTAGTGGTTTATGAGATGGTTCCCTCCAACAGCCCTCCTTATGTCTGCTATGTCACCCTGCCTGGGGGAAGCTGCTTTGGGAGTTTCCAGTTTTGCCCCACAAAAGCTGAGGCCCGGAGGAGTGCTGCAAAGATTGCGCTAATGAATTCTGTGTTTAATGAACATCCTTCCCGAAGAATCACTGATGAGTTCATCGAGAAGAGTGTCTCTGAGGCCCTGGCATCTTTTAATGGCAACAGGGAGGAAGCTGACAACCCAAATACAGGGATTGGTGCCTTCCGATTCATGCTGGAATCCAACAAGGGCAAATCAATGTTGGAGTTCCAGGAGCTAATGACAGTTTTTCAACTGCTACACTGGAATGGCAGCCTTAAGGCCATGAGGGAACGACAATGCTCTCGGCAGGAGGTGTTGGCTCATTATTCGCACCGGGCCCTGGATGATGATATTCGCCACCAAATGGCCTTGGACTGGGTGAGCCGGGAGCAGAGTGTGCCGGGGGCACTGTCTAGAGAGCTGGCCTCTACTGAGCGGGAGCTGGATGAAGCCCGACTGGCAGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTCTTGTGCTGGCTGCTGGGCAGTTGGGCAATATGCATTCTTCCAACTGCTAG
Amino sequence
METMRAQRLQPGVGTSGRGTLRALRPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVVRSFAKHTQGYGRVNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQMALDWVSREQSVPGALSRELASTERELDEARLAGKELRFHKEKKDILVLAAGQLGNMHSSNC*