ENST00000401030.4 SELENOF
Information
- Transcript ID
- ENST00000401030.4
- Genome
- hg19
- Position
- chr1:87,328,984-87,379,809
- Strand
- -
- CDS length
- 435
- Amino acid length
- 145
- Gene symbol
- SELENOF
- Gene type
- protein-coding
- Gene description
- selenoprotein F
- Gene Entrez Gene ID
- 9403
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 87,328,984 | 87,329,288 |
| 5 | 87,333,736 | 87,333,785 |
| 4 | 87,346,345 | 87,346,408 |
| 3 | 87,352,839 | 87,352,879 |
| 2 | 87,368,964 | 87,369,131 |
| 1 | 87,379,711 | 87,379,809 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 87,329,261 | 87,329,288 |
| 5 | CDS | 87,333,736 | 87,333,785 |
| 4 | CDS | 87,346,345 | 87,346,408 |
| 3 | CDS | 87,352,839 | 87,352,879 |
| 2 | CDS | 87,368,964 | 87,369,131 |
| 1 | CDS | 87,379,711 | 87,379,794 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 86,863,301 | 86,914,126 | Link |
CDS sequence
ATGGTAGCGATGGCGGCTGGGCCGAGTGGGTGTCTGGTGCCGGCGTTTGGGCTACGGTTGTTGTTGGCGACTGTGCTTCAAGCGGTGTCTGCTTTTGGGGCAGAGTTTTCATCGGAGGCATGCAGAGAGTTAGGCTTTTCTAGCAACTTGCTTTGCAGCTCTTGTGATCTTCTCGGACAGTTCAACCTGCTTCAGCTGGATCCTGATTGCAGAGGATGCTGTCAGGAGGAAGCACAATTTGAAACCAAAAAGTATTCATCCATTGTTTCTAAGCAAGAATGCCATCACTCAAACTGTATGCAGGAGCTATTCTTGAAGTTTGTGGATGAAAATTGGGAAGGTTCCCTCAAGTCCAAGCTTTTGTTAGGAGTGATAAACCCAAACTGTTCAGAGGACTGCAAATCAAGTATGTCCGTGGTTCAGACCCTGTATTAA
Amino sequence
MVAMAAGPSGCLVPAFGLRLLLATVLQAVSAFGAEFSSEACRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKYSSIVSKQECHHSNCMQELFLKFVDENWEGSLKSKLLLGVINPNCSEDCKSSMSVVQTLY*