ENST00000706660.1 HMGN3
Information
- Transcript ID
- ENST00000706660.1
- Genome
- hg38
- Position
- chr6:79,201,479-79,234,675
- Strand
- -
- CDS length
- 294
- Amino acid length
- 98
- Gene symbol
- HMGN3
- Gene type
- protein-coding
- Gene description
- high mobility group nucleosomal binding domain 3
- Gene Entrez Gene ID
- 9324
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 79,201,479 | 79,202,199 |
| 5 | 79,202,276 | 79,202,389 |
| 4 | 79,203,580 | 79,203,630 |
| 3 | 79,208,547 | 79,208,576 |
| 2 | 79,214,972 | 79,215,022 |
| 1 | 79,234,546 | 79,234,675 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 79,202,167 | 79,202,199 |
| 5 | CDS | 79,202,276 | 79,202,389 |
| 4 | CDS | 79,203,580 | 79,203,630 |
| 3 | CDS | 79,208,547 | 79,208,576 |
| 2 | CDS | 79,214,972 | 79,215,022 |
| 1 | CDS | 79,234,546 | 79,234,560 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr6 | 79,911,196 | 79,944,392 | Link |
CDS sequence
ATGCCGAAGAGAAAGTCTCCAGAGAATACAGAGGGCAAAGATGGATCCAAAGTAACTAAACAGGAGCCCACAAGACGGTCTGCCAGATTGTCAGCGAAACCTGCTCCACCAAAACCTGAACCCAAACCAAGAAAAACATCTGCTAAGAAAGAACCTGGAGCAAAGATTAGCAGAGGTGCTAAAGGGAAGAAGGAGGAAAAGCAGGAAGCTGGAAAGGAAGGTACTGCACCATCTGAAAATGGTGAAACTAAAGCTGAAGAGCACGTTCTTAATGTCTCTTTTTATTGCCTGTAA
Amino sequence
MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAKKEPGAKISRGAKGKKEEKQEAGKEGTAPSENGETKAEEHVLNVSFYCL*