ENST00000358011.8 AIRIM
Information
- Transcript ID
- ENST00000358011.8
- Genome
- hg19
- Position
- chr1:38,147,242-38,156,192
- Strand
- -
- CDS length
- 612
- Amino acid length
- 204
- Gene symbol
- AIRIM
- Gene type
- protein-coding
- Gene description
- AFG2 interacting ribosome maturation factor
- Gene Entrez Gene ID
- 54955
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 38,147,242 | 38,148,832 |
| 4 | 38,148,991 | 38,149,109 |
| 3 | 38,151,945 | 38,152,124 |
| 2 | 38,155,278 | 38,155,555 |
| 1 | 38,156,006 | 38,156,192 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 38,148,795 | 38,148,832 |
| 4 | CDS | 38,148,991 | 38,149,109 |
| 3 | CDS | 38,151,945 | 38,152,124 |
| 2 | CDS | 38,155,278 | 38,155,552 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 37,681,570 | 37,690,520 | Link |
CDS sequence
ATGACTCAAGACCGGCCTCTGCTTGCCGTGCAGGAGGCGCTGAAGAAGTGCTTCCCCGTGGTGGAGGAGCAGCAGGGCCTGTGGCAGAGTGCCCTGCGGGACTGCCAGCCCCTCCTGTCCTCCCTCAGCAACCTGGCGGAACAGCTGCAGGCCGCACAGAACCTGCGGTTTGAGGATGTGCCGGCGCTTCGGGCCTTCCCAGATTTAAAAGAGCGGCTGAGGCGTAAGCAGCTGGTGGCTGGTGACATCGTCCTGGACAAGCTAGGGGAAAGGCTAGCCATCCTCCTCAAGGTGCGAGACATGGTCAGCAGCCATGTGGAGCGAGTGTTTCAGATCTATGAGCAACACGCAGACACAGTTGGCATTGATGCTGTCCTGCAGCCTTCAGCAGTGAGCCCCTCTGTGGCTGACATGTTGGAATGGTTGCAGGATATTGAGAGACATTATCGAAAGTCGTACCTGAAGAGAAAGTATCTTCTTTCGTCTATCCAGTGGGGAGACTTGGCAAACATACAAGCTTTGCCCAAGGCCTGGGACCGAATTTCAAAAGACGAACACCAAGATCTTGTACAAGATATCCTATTGAATGTTTCCTTCTTCCTGGAAGAGTAA
Amino sequence
MTQDRPLLAVQEALKKCFPVVEEQQGLWQSALRDCQPLLSSLSNLAEQLQAAQNLRFEDVPALRAFPDLKERLRRKQLVAGDIVLDKLGERLAILLKVRDMVSSHVERVFQIYEQHADTVGIDAVLQPSAVSPSVADMLEWLQDIERHYRKSYLKRKYLLSSIQWGDLANIQALPKAWDRISKDEHQDLVQDILLNVSFFLEE*