ENST00000396581.6 TRIM40

Information
Transcript ID
ENST00000396581.6
Genome
hg38
Position
chr6:30,136,140-30,148,728
Strand
+
CDS length
777
Amino acid length
259
Gene symbol
TRIM40
Gene type
protein-coding
Gene description
tripartite motif containing 40
Gene Entrez Gene ID
135644
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 30,136,140 30,136,189
2 30,136,733 30,137,381
3 30,145,994 30,146,089
4 30,146,985 30,147,209
5 30,147,520 30,147,542
6 30,147,725 30,148,728
CDS
Exon number Type Start Stop
2 CDS 30,137,037 30,137,381
3 CDS 30,145,994 30,146,089
4 CDS 30,146,985 30,147,209
5 CDS 30,147,520 30,147,542
6 CDS 30,147,725 30,147,812
Other genome
Genome Chromosome Start End Links
hg19 chr6 30,103,917 30,116,505 Link
CDS sequence
ATGATCCCTTTGCAGAAGGACAACCAGGAGGAGGGTGTCTGCCCCATCTGCCAGGAGAGCCTGAAGGAGGCCGTGAGCACCAACTGCGGACATCTCTTCTGTCGAGTGTGCCTGACACAGCATGTGGAGAAGGCCTCAGCCTCTGGGGTCTTCTGCTGCCCCCTCTGCCGGAAGCCCTGTTCTGAGGAGGTGCTAGGGACAGGCTATATCTGCCCCAACCACCAGAAGAGGGTGTGCAGGTTCTGTGAGGAGAGCAGACTTCTTCTATGTGTGGAATGCCTGGTGTCCCCTGAACACATGTCTCATCATGAACTGACCATTGAAAATGCCCTCAGCCACTACAAGGAACGACTCAATCGCCGGAGCAGGAAGCTCAGAAAGGACATTGCAGAACTTCAGCGGCTCAAGGCTCAGCAGGAGAAGAAACTGCAGGCTCTGCAGTTTCAGGTAGACCACGGGAACCACAGGCTGGAGGCTGGGCCGGAGAGCCAGCACCAAACCAGGGAACAGCTGGGTGCCCTCCCTCAGCAGTGGCTGGGCCAGCTGGAGCACATGCCAGCAGAAGCGGCCAGAATCCTTGACATCTCCAGGGCAGTAACACAGCTCAGAAGCCTGGTCATTGATCTGGAAAGGACGGCCAAGGAATTAGACACCAACACACTGAAGAATGCTGGTGACTTACTGAACAGGAGTGCTCCACAGAAATTAGAGGTTATTTATCCCCAGTTGGAGAAAGGAGTCAGTGAATTGCTTCTTCAGCCCCCTCAGAAGCTCTGA
Amino sequence
MIPLQKDNQEEGVCPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVLGTGYICPNHQKRVCRFCEESRLLLCVECLVSPEHMSHHELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQFQVDHGNHRLEAGPESQHQTREQLGALPQQWLGQLEHMPAEAARILDISRAVTQLRSLVIDLERTAKELDTNTLKNAGDLLNRSAPQKLEVIYPQLEKGVSELLLQPPQKL*