ENST00000597855.5 SPIB
Information
- Transcript ID
- ENST00000597855.5
- Genome
- hg38
- Position
- chr19:50,418,941-50,428,124
- Strand
- +
- CDS length
- 414
- Amino acid length
- 138
- Gene symbol
- SPIB
- Gene type
- protein-coding
- Gene description
- Spi-B transcription factor
- Gene Entrez Gene ID
- 6689
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 50,418,941 | 50,418,985 |
| 2 | 50,419,946 | 50,419,973 |
| 3 | 50,422,473 | 50,422,545 |
| 4 | 50,422,823 | 50,423,037 |
| 5 | 50,423,640 | 50,423,755 |
| 6 | 50,428,038 | 50,428,124 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 50,418,963 | 50,418,985 |
| 2 | CDS | 50,419,946 | 50,419,973 |
| 3 | CDS | 50,422,473 | 50,422,545 |
| 4 | CDS | 50,422,823 | 50,423,037 |
| 5 | CDS | 50,423,640 | 50,423,714 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr19 | 50,922,198 | 50,931,381 | Link |
CDS sequence
ATGCTCGCCCTGGAGGCTGCACAGCTCGACGGGCCACACTTCAGCTGTCTGTACCCAGATGGCGTCTTCTATGACCTGGACAGCTGCAAGCATTCCAGCTACCCTGATTCAGAGGGGGCTCCTGACTCCCTGTGGGACTGGACTGTGGCCCCACCTGTCCCAGCCACCCCCTATGAAGCCTTCGACCCGGCAGCAGCCGCTTTTAGCCACCCCCAGGCTGCCCAGCTCTGCTACGAACCCCCCACCTACAGCCCTGCAGGGAACCTCGAACTGGCCCCCAGCCTGGAGGCCCCGGGGCCTGGCCTCCCTGCATACCCCACGGAGAACTTCGCTAGCCAGCCCTGTGCTATCAGAGGAGGAAGACTTACCGTTGGACAGCCCTGCCCTGGAGGTCTCGGACAGCGAGTCGGATGA
Amino sequence
MLALEAAQLDGPHFSCLYPDGVFYDLDSCKHSSYPDSEGAPDSLWDWTVAPPVPATPYEAFDPAAAAFSHPQAAQLCYEPPTYSPAGNLELAPSLEAPGPGLPAYPTENFASQPCAIRGGRLTVGQPCPGGLGQRVG*