ENST00000086933.3 GSC2

Information
Transcript ID
ENST00000086933.3
Genome
hg38
Position
chr22:19,146,993-19,150,292
Strand
-
CDS length
618
Amino acid length
206
Gene symbol
GSC2
Gene type
protein-coding
Gene description
goosecoid homeobox 2
Gene Entrez Gene ID
2928
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 19,146,993 19,149,095
2 19,149,663 19,149,916
1 19,150,025 19,150,292
CDS
Exon number Type Start Stop
3 CDS 19,148,991 19,149,095
2 CDS 19,149,663 19,149,916
1 CDS 19,150,025 19,150,283
Other genome
Genome Chromosome Start End Links
hg19 chr22 19,134,506 19,137,805 Link
CDS sequence
ATGGCGGCAGCGGCTGGGGGCGCGGCGAGCCGCCGGGGTGCCGGGCGGCCCTGCCCCTTCTCCATCGAGCACATCCTCTCCAGCCTGCCCGAGCGGAGCCTCCCGGCCCGGGCCGCCTGCCCACCGCAGCCCGCCGGTCGCCAGAGCCCCGCGAAGCCAGAGGAGCCCGGGGCGCCCGAGGCTGCGCCCTGCGCCTGCTGCTGCTGCTGCGGCCCCCGCGCGGCGCCCTGCGGGCCCCCAGAGGCGGCCGCCGGGCTGGGCGCTCGTCTGGCGTGGCCGCTGAGGCTGGGACCGGCGGTGCCCTTGTCTCTGGGTGCGCCAGCCGGAGGTTCCGGGGCGCTCCCGGGCGCGGTCGGCCCGGGTTCGCAGCGGCGCACGAGGCGCCACCGCACCATCTTCAGCGAAGAGCAGCTGCAGGCGCTCGAGGCGCTTTTCGTGCAGAACCAGTATCCTGACGTGAGTACGCGCGAGCGCCTGGCCGGCCGCATCCGCCTTCGCGAGGAGCGCGTGGAGGTCTGGTTCAAGAACCGCCGGGCCAAATGGCGACACCAGAAGCGCGCGTCGGCTTCCGCGAGGCTCCTGCCCGGCGTCAAGAAGTCCCCGAAGGGGAGCTGCTGA
Amino sequence
MAAAAGGAASRRGAGRPCPFSIEHILSSLPERSLPARAACPPQPAGRQSPAKPEEPGAPEAAPCACCCCCGPRAAPCGPPEAAAGLGARLAWPLRLGPAVPLSLGAPAGGSGALPGAVGPGSQRRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGRIRLREERVEVWFKNRRAKWRHQKRASASARLLPGVKKSPKGSC*