ENST00000601529.5 OCEL1
Information
- Transcript ID
- ENST00000601529.5
- Genome
- hg38
- Position
- chr19:17,226,225-17,229,215
- Strand
- +
- CDS length
- 498
- Amino acid length
- 166
- Gene symbol
- OCEL1
- Gene type
- protein-coding
- Gene description
- occludin/ELL domain containing 1
- Gene Entrez Gene ID
- 79629
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 17,226,225 | 17,226,316 |
| 2 | 17,226,693 | 17,226,869 |
| 3 | 17,226,994 | 17,227,199 |
| 4 | 17,228,256 | 17,228,309 |
| 5 | 17,228,803 | 17,229,215 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 17,226,248 | 17,226,316 |
| 2 | CDS | 17,226,693 | 17,226,869 |
| 3 | CDS | 17,226,994 | 17,227,199 |
| 4 | CDS | 17,228,256 | 17,228,301 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr19 | 17,337,034 | 17,340,024 | Link |
CDS sequence
ATGCACAACCCGGACGGAAGTGCCTCTCCGACAGCAGATCCAGGCTCGGAGCTCCAGACGCTGGGACAGGCCGCCCGCAGACCACCCCCGCCGCGCGCGGGACACGACGCCCCCCGCAGGACCCGCCCATCAGCCCGGAAACCCCTGAGCTGCTTCTCCCGGAGGCCGATGCCCACCCGGGAGCCCCCAAAGACTCGCGGCTCCCGGGGGCACCTGCATACTCACCCGCCTGGGCCTGGGCCCCCGCTGCAGGGACTGGCGCCCCGAGGCCTCAAAACCAGCGCCCCCCGCCCTCCGTGCCAGCCCCAGCCGGGACCCCACAAGGCAAAGACCAAGAAGATTGTGTTTGAGGATGAGTTGCTCTCCCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGCCATCCCTAAGGGGCATAAGCCTAGGCCCCACCCAGTGCCCGACTATGAGCTAAGGAGGCCCAAGTTGCAGCCCGGGTTTGGAGGGAGTTTGAGATGA
Amino sequence
MHNPDGSASPTADPGSELQTLGQAARRPPPPRAGHDAPRRTRPSARKPLSCFSRRPMPTREPPKTRGSRGHLHTHPPGPGPPLQGLAPRGLKTSAPRPPCQPQPGPHKAKTKKIVFEDELLSQALLGAKKPIGAIPKGHKPRPHPVPDYELRRPKLQPGFGGSLR*