ENST00000550383.1 P2RX5-TAX1BP3
Information
- Transcript ID
- ENST00000550383.1
- Genome
- hg38
- Position
- chr17:3,663,063-3,696,194
- Strand
- -
- CDS length
- 1,299
- Amino acid length
- 433
- Gene symbol
- P2RX5-TAX1BP3
- Gene type
- ncRNA
- Gene description
- P2RX5-TAX1BP3 readthrough (NMD candidate)
- Gene Entrez Gene ID
- 100533970
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 15 | 3,663,063 | 3,663,885 |
| 14 | 3,664,195 | 3,664,272 |
| 13 | 3,664,679 | 3,664,798 |
| 12 | 3,669,058 | 3,672,493 |
| 11 | 3,679,590 | 3,679,784 |
| 10 | 3,681,896 | 3,681,978 |
| 9 | 3,688,012 | 3,688,105 |
| 8 | 3,688,626 | 3,688,759 |
| 7 | 3,689,492 | 3,689,630 |
| 6 | 3,690,070 | 3,690,150 |
| 5 | 3,690,427 | 3,690,523 |
| 4 | 3,690,605 | 3,690,680 |
| 3 | 3,690,956 | 3,691,027 |
| 2 | 3,691,644 | 3,691,794 |
| 1 | 3,695,869 | 3,696,194 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 12 | CDS | 3,672,454 | 3,672,493 |
| 11 | CDS | 3,679,590 | 3,679,784 |
| 10 | CDS | 3,681,896 | 3,681,978 |
| 9 | CDS | 3,688,012 | 3,688,105 |
| 8 | CDS | 3,688,626 | 3,688,759 |
| 7 | CDS | 3,689,492 | 3,689,630 |
| 6 | CDS | 3,690,070 | 3,690,150 |
| 5 | CDS | 3,690,427 | 3,690,523 |
| 4 | CDS | 3,690,605 | 3,690,680 |
| 3 | CDS | 3,690,956 | 3,691,027 |
| 2 | CDS | 3,691,644 | 3,691,794 |
| 1 | CDS | 3,695,869 | 3,696,005 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 3,566,357 | 3,599,488 | Link |
CDS sequence
ATGGGGCAGGCGGGCTGCAAGGGGCTCTGCCTGTCGCTGTTCGACTACAAGACCGAGAAGTATGTCATCGCCAAGAACAAGAAGGTGGGCCTGCTGTACCGGCTGCTGCAGGCCTCCATCCTGGCGTACCTGGTCGTATGGGTGTTCCTGATAAAGAAGGGTTACCAAGACGTCGACACCTCCCTGCAGAGTGCTGTCATCACCAAAGTCAAGGGCGTGGCCTTCACCAACACCTCGGATCTTGGGCAGCGGATCTGGGATGTCGCCGACTACGTCATTCCAGCCCAGGGAGAGAACGTCTTTTTTGTGGTCACCAACCTGATTGTGACCCCCAACCAGCGGCAGAACGTCTGTGCTGAGAATGAAGGCATTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGTTACAGCTGGAAACGGAGTGAAGACCGGCCGCTGCCTGCGGAGAGAGAACTTGGCCAGGGGCACCTGTGAGATCTTTGCCTGGTGCCCGTTGGAGACAAGCTCCAGGCCGGAGGAGCCATTCCTGAAGGAGGCCGAAGACTTCACCATTTTCATAAAGAACCACATCCGTTTCCCCAAATTCAACTTCTCCAAAAGCAATGTGATGGACGTCAAGGACAGATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAACCACTACTGCCCCATCTTCCGACTGGGCTCCGTGATCCGCTGGGCCGGGAGCGACTTCCAGGATATAGCCCTGGAGGGTGGCGTGATAGGAATTAATATTGAATGGAACTGTGATCTTGATAAAGCTGCCTCTGAGTGCCACCCTCACTATTCTTTTAGCCGTCTGGACAATAAACTTTCAAAGTCTGTCTCCTCCGGGTACAACTTCAGATTTGCCAGATATTACCGAGACGCAGCCGGGGTGGAGTTCCGCACCCTGATGAAAGCCTACGGGATCCGCTTTGACGTGATGGTGAACGGCAAGGGTGCTTTCTTCTGCGACCTGGTACTCATCTACCTCATCAAAAAGAGAGAGTTTTACCGTGACAAGAAGTACGAGGAAGTGAGGGGCCTAGAAGACAGTTCCCAGGAGGCCGAGGACGAGGCATCGGGGCTGGGGCTATCTGAGCAGCTCACATCTGGGCCAGGGCTGCTGGGGATGCCGGAGCAGCAGGAGCTGCAGGAGCCACCCGAGGCGAAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCCCACAGGCTGAGGACTCCCTCTGCTTCTCCCTTACACCAGGAATGA
Amino sequence
MGQAGCKGLCLSLFDYKTEKYVIAKNKKVGLLYRLLQASILAYLVVWVFLIKKGYQDVDTSLQSAVITKVKGVAFTNTSDLGQRIWDVADYVIPAQGENVFFVVTNLIVTPNQRQNVCAENEGIPDGACSKDSDCHAGEAVTAGNGVKTGRCLRRENLARGTCEIFAWCPLETSSRPEEPFLKEAEDFTIFIKNHIRFPKFNFSKSNVMDVKDRSFLKSCHFGPKNHYCPIFRLGSVIRWAGSDFQDIALEGGVIGINIEWNCDLDKAASECHPHYSFSRLDNKLSKSVSSGYNFRFARYYRDAAGVEFRTLMKAYGIRFDVMVNGKGAFFCDLVLIYLIKKREFYRDKKYEEVRGLEDSSQEAEDEASGLGLSEQLTSGPGLLGMPEQQELQEPPEAKRGSSSQKGNGSVCPQLLEPHRLRTPSASPLHQE*