ENST00000578122.5 IFT20
Information
- Transcript ID
- ENST00000578122.5
- Genome
- hg38
- Position
- chr17:28,328,887-28,335,435
- Strand
- -
- CDS length
- 426
- Amino acid length
- 142
- Gene symbol
- IFT20
- Gene type
- protein-coding
- Gene description
- intraflagellar transport 20
- Gene Entrez Gene ID
- 90410
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 28,328,887 | 28,329,068 |
| 5 | 28,329,173 | 28,329,276 |
| 4 | 28,330,443 | 28,330,528 |
| 3 | 28,331,859 | 28,331,987 |
| 2 | 28,332,146 | 28,332,382 |
| 1 | 28,335,340 | 28,335,435 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 28,329,038 | 28,329,068 |
| 5 | CDS | 28,329,173 | 28,329,276 |
| 4 | CDS | 28,330,443 | 28,330,528 |
| 3 | CDS | 28,331,859 | 28,331,987 |
| 2 | CDS | 28,332,146 | 28,332,221 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 26,655,913 | 26,662,461 | Link |
CDS sequence
ATGACACACCTCCTCCTGACTGCCACTGTCACTCCTTCAGAGCAGAACTCCTCTAGGGAACCTGGATGGGAAACAGCCATGGCCAAGGACATCCTGGGTGAAGCAGGGCTACACTTTGATGAACTGAACAAGCTGAGGGTGTTGGACCCAGAGGTTACCCAGCAGACCATAGAGCTGAAGGAAGAGTGCAAAGACTTTGTGGACAAAATTGGCCAGTTTCAGAAAATAGTTGGTGGTTTAATTGAGCTTGTTGATCAACTTGCAAAAGAAGCAGAAAATGAAAAGATGAAGGCCATCGGTGCTCGGAACTTGCTCAAATCTATAGCAAAGCAGAGAGAAGCTCAACAGCAGCAACTTCAAGCCCTAATAGCAGAAAAGAAAATGCAGCTAGAAAGGAATAGCATCTCACTTGTCATCCTGATTTGA
Amino sequence
MTHLLLTATVTPSEQNSSREPGWETAMAKDILGEAGLHFDELNKLRVLDPEVTQQTIELKEECKDFVDKIGQFQKIVGGLIELVDQLAKEAENEKMKAIGARNLLKSIAKQREAQQQQLQALIAEKKMQLERNSISLVILI*