ENST00000294172.7 NXF1
Information
- Transcript ID
- ENST00000294172.7
- Genome
- hg38
- Position
- chr11:62,792,130-62,805,440
- Strand
- -
- CDS length
- 1,860
- Amino acid length
- 620
- Gene symbol
- NXF1
- Gene type
- protein-coding
- Gene description
- nuclear RNA export factor 1
- Gene Entrez Gene ID
- 10482
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 21 | 62,792,130 | 62,792,514 |
| 20 | 62,792,641 | 62,792,701 |
| 19 | 62,794,258 | 62,794,440 |
| 18 | 62,794,935 | 62,795,007 |
| 17 | 62,795,901 | 62,795,943 |
| 16 | 62,796,066 | 62,796,181 |
| 15 | 62,796,287 | 62,796,345 |
| 14 | 62,796,460 | 62,796,567 |
| 13 | 62,797,183 | 62,797,238 |
| 12 | 62,797,318 | 62,797,386 |
| 11 | 62,798,539 | 62,798,575 |
| 10 | 62,800,377 | 62,800,486 |
| 9 | 62,801,094 | 62,801,201 |
| 8 | 62,801,329 | 62,801,417 |
| 7 | 62,801,562 | 62,801,631 |
| 6 | 62,801,739 | 62,801,819 |
| 5 | 62,801,942 | 62,802,046 |
| 4 | 62,802,177 | 62,802,260 |
| 3 | 62,803,419 | 62,803,572 |
| 2 | 62,803,792 | 62,803,978 |
| 1 | 62,805,329 | 62,805,440 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 21 | CDS | 62,792,476 | 62,792,514 |
| 20 | CDS | 62,792,641 | 62,792,701 |
| 19 | CDS | 62,794,258 | 62,794,440 |
| 18 | CDS | 62,794,935 | 62,795,007 |
| 17 | CDS | 62,795,901 | 62,795,943 |
| 16 | CDS | 62,796,066 | 62,796,181 |
| 15 | CDS | 62,796,287 | 62,796,345 |
| 14 | CDS | 62,796,460 | 62,796,567 |
| 13 | CDS | 62,797,183 | 62,797,238 |
| 12 | CDS | 62,797,318 | 62,797,386 |
| 11 | CDS | 62,798,539 | 62,798,575 |
| 10 | CDS | 62,800,377 | 62,800,486 |
| 9 | CDS | 62,801,094 | 62,801,201 |
| 8 | CDS | 62,801,329 | 62,801,417 |
| 7 | CDS | 62,801,562 | 62,801,631 |
| 6 | CDS | 62,801,739 | 62,801,819 |
| 5 | CDS | 62,801,942 | 62,802,046 |
| 4 | CDS | 62,802,177 | 62,802,260 |
| 3 | CDS | 62,803,419 | 62,803,572 |
| 2 | CDS | 62,803,792 | 62,803,978 |
| 1 | CDS | 62,805,329 | 62,805,356 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 62,559,602 | 62,572,912 | Link |
CDS sequence
ATGGCGGACGAGGGGAAGTCGTACAGCGAACACGATGATGAACGCGTTAATTTCCCTCAAAGAAAGAAGAAAGGCCGGGGTCCCTTCCGGTGGAAATATGGTGAAGGAAACCGTAGGTCTGGAAGAGGCGGTTCTGGTATTCGGTCTTCCCGCCTTGAGGAAGATGATGGAGATGTGGCAATGAGTGATGCCCAGGATGGTCCCCGAGTACGATACAACCCCTATACCACCCGACCTAACCGTCGGGGTGATACTTGGCATGATCGAGATCGCATTCATGTTACTGTGCGGAGAGACAGAGCTCCTCCAGAGAGAGGAGGGGCTGGCACCAGCCAGGATGGGACCTCAAAGAACTGGTTCAAGATTACAATTCCTTATGGCAGAAAGTATGACAAGGCATGGCTCCTGAGCATGATTCAGAGCAAGTGCAGTGTGCCCTTCACCCCTATTGAGTTTCACTATGAGAATACACGGGCCCAGTTCTTCGTTGAAGACGCCAGTACTGCCTCTGCATTGAAGGCTGTCAACTATAAGATTTTGGATCGGGAGAACCGAAGGATATCTATCATCATCAACTCTTCTGCTCCACCCCACACTATACTGAATGAACTGAAGCCAGAACAAGTAGAACAGCTAAAGCTGATCATGAGCAAACGATACGATGGCTCCCAACAAGCCCTTGACCTCAAAGGCCTCCGTTCAGACCCAGATTTGGTGGCCCAGAACATTGACGTTGTCCTGAATCGCAGAAGCTGTATGGCAGCTACCCTGAGGATCATTGAAGAGAACATCCCTGAGCTATTGTCCTTGAACTTGAGCAACAACAGGCTGTACAGGCTGGATGACATGTCTAGCATTGTTCAGAAGGCACCCAACCTGAAGATCCTAAACCTTTCTGGAAATGAATTGAAGTCTGAGCGGGAATTGGACAAGATAAAGGGGCTGAAGCTAGAAGAGCTCTGGCTCGATGGAAACTCCCTGTGTGACACCTTCCGAGACCAGTCCACCTACATCAGCGCCATTCGCGAACGATTTCCCAAGTTACTACGCCTGGATGGCCATGAGCTACCCCCACCAATTGCCTTTGATGTTGAAGCCCCCACGACGTTACCGCCCTGCAAGGGAAGCTATTTTGGAACAGAAAACTTGAAGAGTCTGGTCTTGCACTTCCTGCAACAGTACTATGCAATTTACGACTCTGGAGACCGACAAGGGCTCCTGGATGCCTACCATGATGGGGCCTGCTGTTCCCTGAGCATTCCTTTCATTCCTCAGAACCCTGCCCGAAGCAGCTTAGCCGAGTATTTCAAGGATAGCAGAAATGTGAAGAAGCTTAAAGACCCTACCTTGCGGTTCCGGCTGCTGAAGCACACGCGTCTCAACGTTGTTGCCTTCCTCAATGAGTTGCCCAAAACCCAGCACGACGTCAATTCCTTCGTGGTAGACATAAGCGCCCAGACAAGCACATTGCTGTGTTTTTCTGTCAATGGAGTCTTCAAGGAAGTGGACGGAAAGTCCCGGGATTCTTTGCGAGCCTTCACCCGGACATTCATTGCTGTTCCTGCTAGCAATTCAGGGCTATGTATTGTAAATGATGAGCTATTTGTGCGGAATGCCAGTTCTGAAGAGATCCAAAGAGCCTTCGCTATGCCTGCACCCACGCCTTCCTCCAGCCCGGTGCCCACCCTCTCTCCAGAGCAGCAGGAAATGTTGCAAGCATTCTCTACCCAGTCTGGCATGAACCTCGAGTGGTCCCAGAAGTGCCTTCAGGACAACAACTGGGACTACACCAGATCTGCCCAGGCCTTCACTCATCTCAAGGCCAAGGGCGAGATCCCAGAAGTGGCATTCATGAAGTGA
Amino sequence
MADEGKSYSEHDDERVNFPQRKKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDGDVAMSDAQDGPRVRYNPYTTRPNRRGDTWHDRDRIHVTVRRDRAPPERGGAGTSQDGTSKNWFKITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNASSEEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEIPEVAFMK*