ENST00000472024.3 CHMP2B
Information
- Transcript ID
- ENST00000472024.3
- Genome
- hg38
- Position
- chr3:87,227,309-87,255,486
- Strand
- +
- CDS length
- 690
- Amino acid length
- 230
- Gene symbol
- CHMP2B
- Gene type
- protein-coding
- Gene description
- charged multivesicular body protein 2B
- Gene Entrez Gene ID
- 25978
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 87,227,309 | 87,227,556 |
| 2 | 87,240,323 | 87,240,453 |
| 3 | 87,240,699 | 87,240,790 |
| 4 | 87,245,714 | 87,245,908 |
| 5 | 87,249,875 | 87,249,977 |
| 6 | 87,253,404 | 87,253,510 |
| 7 | 87,253,712 | 87,255,486 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 87,240,372 | 87,240,453 |
| 3 | CDS | 87,240,699 | 87,240,790 |
| 4 | CDS | 87,245,714 | 87,245,908 |
| 5 | CDS | 87,249,875 | 87,249,977 |
| 6 | CDS | 87,253,404 | 87,253,510 |
| 7 | CDS | 87,253,712 | 87,253,822 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr3 | 87,276,459 | 87,304,636 | Link |
CDS sequence
ATGATCTCGGCTCAACGCAACCATCACCTCCCAGATTCAAGCGATTCTTCTACCTCAGCCTACCGAGTAGCTCGGATTACAGATGTAATAAAGGAACAGAATCGAGAGTTACGAGGTACACAGAGGGCTATAATCAGAGATCGAGCAGCTTTAGAGAAACAAGAAAAACAGCTGGAATTAGAAATTAAGAAAATGGCCAAGATTGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCTACGGAAACAGAAGACGAGAACTTTTGCTGTAAGTTCAAAAGTTACTTCTATGTCTACACAAACAAAAGTGATGAATTCCCAAATGAAGATGGCTGGAGCAATGTCTACTACAGCAAAAACAATGCAGGCAGTTAACAAGAAGATGGATCCACAAAAGACATTACAAACAATGCAGAATTTCCAGAAGGAAAACATGAAAATGGAAATGACTGAAGAAATGATCAATGATACACTTGATGACATCTTTGACGGTTCTGATGACGAAGAAGAAAGCCAGGATATTGTGAATCAAGTTCTTGATGAAATTGGAATTGAAATTTCTGGAAAGATGGCCAAAGCTCCATCAGCTGCTCGAAGCTTACCATCTGCCTCTACTTCAAAGGCTACAATCTCAGATGAAGAGATTGAACGGCAACTCAAGGCTTTAGGAGTAGATTAG
Amino sequence
MISAQRNHHLPDSSDSSTSAYRVARITDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISDEEIERQLKALGVD*