ENST00000376316.5 GTF2H4

Information
Transcript ID
ENST00000376316.5
Genome
hg38
Position
chr6:30,908,221-30,914,106
Strand
+
CDS length
1,389
Amino acid length
463
Gene symbol
GTF2H4
Gene type
protein-coding
Gene description
general transcription factor IIH subunit 4
Gene Entrez Gene ID
2968
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 30,908,221 30,908,378
2 30,909,034 30,909,173
3 30,909,435 30,909,539
4 30,909,932 30,910,063
5 30,910,665 30,910,761
6 30,910,853 30,910,941
7 30,911,158 30,911,269
8 30,911,431 30,911,499
9 30,911,684 30,911,767
10 30,912,014 30,912,146
11 30,912,328 30,912,458
12 30,913,110 30,913,157
13 30,913,309 30,913,387
14 30,913,811 30,914,106
CDS
Exon number Type Start Stop
2 CDS 30,909,037 30,909,173
3 CDS 30,909,435 30,909,539
4 CDS 30,909,932 30,910,063
5 CDS 30,910,665 30,910,761
6 CDS 30,910,853 30,910,941
7 CDS 30,911,158 30,911,269
8 CDS 30,911,431 30,911,499
9 CDS 30,911,684 30,911,767
10 CDS 30,912,014 30,912,146
11 CDS 30,912,328 30,912,458
12 CDS 30,913,110 30,913,157
13 CDS 30,913,309 30,913,387
14 CDS 30,913,811 30,913,983
Other genome
Genome Chromosome Start End Links
hg19 chr6 30,875,998 30,881,883 Link
CDS sequence
ATGGAGAGCACCCCTTCAAGGGGACTGAACCGAGTACACCTACAATGCAGGAATCTGCAGGAATTCTTAGGGGGCCTGAGCCCTGGGGTATTGGACCGATTGTATGGGCACCCTGCCACATGTCTGGCTGTCTTCAGGGAGCTCCCATCCTTGGCTAAGAACTGGGTGATGCGGATGCTCTTTCTGGAGCAGCCTTTGCCACAGGCTGCTGTAGCTCTGTGGGTAAAGAAGGAATTCAGCAAGGCTCAGGAGGAAAGTACAGGGCTGCTGAGCGGCCTCCGGATCTGGCACACACAGCTGCTCCCAGGCGGGCTCCAGGGCCTCATCCTCAACCCCATTTTCCGCCAGAACCTCCGCATTGCCCTTCTGGGTGGGGGGAAGGCCTGGTCTGATGACACAAGTCAGCTGGGACCAGACAAGCATGCCCGGGACGTTCCCTCCCTTGACAAGTACGCCGAGGAGCGATGGGAGGTGGTCTTGCACTTCATGGTGGGCTCCCCCAGTGCAGCTGTCAGCCAGGACTTGGCTCAGCTCCTCAGCCAGGCTGGGCTCATGAAGAGTACTGAACCTGGAGAGCCGCCCTGCATTACTTCCGCTGGCTTCCAGTTCCTGTTGCTGGACACCCCGGCTCAGCTCTGGTACTTTATGTTGCAGTATTTGCAGACAGCCCAGAGCCGGGGCATGGACCTGGTAGAGATTCTCTCCTTCCTCTTCCAGCTCAGCTTCTCTACTCTGGGCAAGGATTACTCTGTGGAAGGTATGAGTGATTCTCTGTTGAACTTCCTGCAACATCTGCGTGAGTTTGGGCTTGTTTTCCAGAGGAAGAGGAAATCTCGGCGTTACTACCCCACACGCCTGGCCATCAATCTCTCATCAGGTGTCTCTGGAGCTGGGGGCACTGTGCATCAGCCAGGTTTCATTGTCGTGGAAACCAATTACCGACTGTATGCCTACACGGAGTCGGAGCTGCAGATTGCCCTCATTGCCCTCTTCTCTGAGATGCTCTATCGGTTCCCCAACATGGTGGTGGCGCAGGTGACCCGGGAGAGTGTGCAGCAGGCAATCGCCAGTGGCATCACAGCCCAGCAGATAATCCATTTCCTAAGGACAAGAGCCCACCCAGTGATGCTCAAACAGACACCTGTGCTGCCCCCCACCATCACCGACCAGATCCGGCTCTGGGAGCTGGAAAGGGACAGACTCCGGTTCACTGAGGGTGTCCTGTATAACCAGTTCCTGTCGCAAGTGGACTTTGAGCTGCTGCTGGCCCACGCGCGGGAGCTGGGCGTGCTCGTGTTCGAGAACTCGGCCAAGCGGCTCATGGTGGTGACCCCGGCCGGGCACAGCGACGTCAAGCGCTTTTGGAAGCGGCAGAAACATAGCTCCTGA
Amino sequence
MESTPSRGLNRVHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRIALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLSQAGLMKSTEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGGTVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS*