ENST00000552546.5 TMEM106C
Information
- Transcript ID
- ENST00000552546.5
- Genome
- hg38
- Position
- chr12:47,963,607-47,968,376
- Strand
- +
- CDS length
- 540
- Amino acid length
- 180
- Gene symbol
- TMEM106C
- Gene type
- protein-coding
- Gene description
- transmembrane protein 106C
- Gene Entrez Gene ID
- 79022
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 47,963,607 | 47,963,633 |
| 2 | 47,964,209 | 47,964,314 |
| 3 | 47,965,878 | 47,965,997 |
| 4 | 47,966,089 | 47,966,229 |
| 5 | 47,966,683 | 47,966,732 |
| 6 | 47,967,208 | 47,967,261 |
| 7 | 47,968,133 | 47,968,376 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 47,964,237 | 47,964,314 |
| 3 | CDS | 47,965,878 | 47,965,997 |
| 4 | CDS | 47,966,089 | 47,966,229 |
| 5 | CDS | 47,966,683 | 47,966,732 |
| 6 | CDS | 47,967,208 | 47,967,261 |
| 7 | CDS | 47,968,133 | 47,968,229 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 48,357,390 | 48,362,159 | Link |
CDS sequence
ATGGGGTCTCAGCATTCCGCTGCTGCTCGCCCCTCCTCCTGCAGGCGAAAGCAAGAAGATGACAGGGACGGTTTGCTGGCATCTGGTTTGGTGGTTTTCTTCCTGTTTCCGCATTCAGTCCTTGTGGATGATGACGGCATCAAAGTGGTGAAAGTCACATTTAATAAGCAAGACTCCCTTGTAATTCTCACCATCATGGCCACCCTGAAAATCAGGAACTCCAACTTCTACACGGTGGCAGTGACCAGCCTGTCCAGCCAGATTCAGTACATGAACACAGTGGTCAGTACATATGTGACTACTAACGTCTCCCTTATTCCACCTCGGAGTGAGCAACTGGTGAATTTTACCGGGAAGGCCGAGATGGGAGGACCGTTTTCCTATGTGTACTTCTTCTGCACGGTACCTGAGATCCTGGTGCACAACATAGTGATCTTCATGCGAACTTCAGTGAAGATTTCATACATTGGCCTCATGACCCAGAGCTCCTTGGAGACACATCACTATGTGGATTGTGGAGGAAATTCCACAGCTATTTAA
Amino sequence
MGSQHSAAARPSSCRRKQEDDRDGLLASGLVVFFLFPHSVLVDDDGIKVVKVTFNKQDSLVILTIMATLKIRNSNFYTVAVTSLSSQIQYMNTVVSTYVTTNVSLIPPRSEQLVNFTGKAEMGGPFSYVYFFCTVPEILVHNIVIFMRTSVKISYIGLMTQSSLETHHYVDCGGNSTAI*