ENST00000343736.9 TSPOAP1

Information
Transcript ID
ENST00000343736.9
Genome
hg38
Position
chr17:58,301,231-58,328,795
Strand
-
CDS length
5,574
Amino acid length
1,858
Gene symbol
TSPOAP1
Gene type
protein-coding
Gene description
TSPO associated protein 1
Gene Entrez Gene ID
9256
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
32 58,301,231 58,302,447
31 58,304,338 58,304,399
30 58,305,061 58,305,171
29 58,305,387 58,305,458
28 58,305,540 58,305,643
27 58,305,833 58,305,865
26 58,306,342 58,306,413
25 58,306,800 58,306,968
24 58,307,611 58,307,762
23 58,307,842 58,307,941
22 58,308,541 58,309,380
21 58,309,967 58,310,158
20 58,310,512 58,310,751
19 58,310,836 58,311,213
18 58,311,571 58,311,722
17 58,311,892 58,312,722
16 58,316,023 58,316,132
15 58,316,425 58,316,540
14 58,318,280 58,318,452
13 58,319,090 58,319,294
12 58,320,109 58,320,129
11 58,320,531 58,320,581
10 58,322,308 58,322,412
9 58,322,654 58,322,776
8 58,322,950 58,323,039
7 58,323,298 58,323,381
6 58,323,468 58,323,545
5 58,324,811 58,325,002
4 58,325,534 58,325,713
3 58,326,293 58,326,421
2 58,326,683 58,326,790
1 58,327,588 58,328,795
CDS
Exon number Type Start Stop
31 CDS 58,304,370 58,304,399
30 CDS 58,305,061 58,305,171
29 CDS 58,305,387 58,305,458
28 CDS 58,305,540 58,305,643
27 CDS 58,305,833 58,305,865
26 CDS 58,306,342 58,306,413
25 CDS 58,306,800 58,306,968
24 CDS 58,307,611 58,307,762
23 CDS 58,307,842 58,307,941
22 CDS 58,308,541 58,309,380
21 CDS 58,309,967 58,310,158
20 CDS 58,310,512 58,310,751
19 CDS 58,310,836 58,311,213
18 CDS 58,311,571 58,311,722
17 CDS 58,311,892 58,312,722
16 CDS 58,316,023 58,316,132
15 CDS 58,316,425 58,316,540
14 CDS 58,318,280 58,318,452
13 CDS 58,319,090 58,319,294
12 CDS 58,320,109 58,320,129
11 CDS 58,320,531 58,320,581
10 CDS 58,322,308 58,322,412
9 CDS 58,322,654 58,322,776
8 CDS 58,322,950 58,323,039
7 CDS 58,323,298 58,323,381
6 CDS 58,323,468 58,323,545
5 CDS 58,324,811 58,325,002
4 CDS 58,325,534 58,325,713
3 CDS 58,326,293 58,326,421
2 CDS 58,326,683 58,326,790
1 CDS 58,327,588 58,327,920
Other genome
Genome Chromosome Start End Links
hg19 chr17 56,378,592 56,406,156 Link
CDS sequence
ATGGAGCAACTGACAACCCTCCCACGGCCTGGGGACCCTGGAGCCATGGAGCCATGGGCACTGCCCACCTGGCATAGCTGGACTCCAGGTCGAGGGGGTGAACCTAGCAGTGCAGCCCCAAGCATCGCTGATACTCCTCCGGCAGCTCTGCAGCTTCAAGAACTGAGGTCTGAGGAGAGTTCCAAGCCCAAAGGAGACGGGAGCTCCAGGCCCGTGGGGGGAACTGACCCTGAAGGAGCAGAGGCTTGTCTGCCCAGCCTGGGCCAGCAAGCATCCAGCTCTGGACCCGCCTGCCAGAGGCCAGAGGATGAGGAAGTGGAGGCTTTCCTGAAGGCCAAGCTGAATATGAGCTTTGGGGACAGGCCCAATCTGGAGCTGCTGAGGGCCCTGGGGGAGCTGCGGCAGCGCTGTGCCATCCTTAAGGAGGAAAACCAGATGCTGAGGAAGAGCAGCTTCCCTGAGACAGAAGAGAAGGTGCGGAGGCTGAAGAGGAAGAACGCCGAGCTGGCGGTCATTGCCAAGCGCCTGGAGGAGAGGGCCCGAAAGCTGCAGGAAACGAACCTGAGGGTGGTGAGTGCCCCCTTGCCCCGGCCGGGGACCAGCTTGGAGTTGTGTCGGAAGGCCCTAGCCCGCCAGCGAGCCCGGGACCTCAGTGAGACAGCCAGTGCACTGCTGGCCAAGGACAAGCAGATTGCTGCCTTGCAGCGGGAGTGCAGGGAGCTGCAGGCCAGGCTCACTCTGGTGGGCAAGGAGGGTCCCCAGTGGCTCCACGTGCGGGACTTCGATCGGCTGCTGCGCGAGTCCCAGCGGGAGGTGCTGCGGCTGCAGAGGCAGATCGCGCTGCGCAACCAGCGGGAGACGCTCCCGCTCCCGCCGTCCTGGCCCCCGGGCCCTGCTCTCCAGGCCAGAGCAGGGGCGCCTGCTCCCGGGGCCCCGGGAGAGGCCACGCCCCAGGAGGATGCGGACAACCTACCCGTGATTCTAGGGGAGCCAGAGAAAGAGCAGAGGGTGCAGCAGCTGGAATCGGAGCTCAGCAAGAAGCGGAAGAAATGCGAGAGCCTGGAGCAGGAAGCCCGGAAAAAGCAGAGGCGATGTGAGGAGCTGGAACTGCAGCTGAGACAAGCGCAGAATGAGAATGCCCGCCTGGTGGAGGAGAACTCCCGGCTCAGTGGGAGAGCCACAGAGAAGGAGCAGGTGGAGTGGGAGAATGCGGAGCTGAGGGGCCAGCTCCTGGGGGTGACACAGGAGAGGGACTCAGCCCTTCGCAAGAGCCAGGGCCTGCAGAGCAAGCTGGAGAGCCTGGAGCAAGTGCTGAAGCACATGCGGGAGGTGGCCCAGCGGCGGCAGCAGCTGGAGGTGGAGCATGAACAGGCTCGGCTCAGCCTACGGGAGAAGCAGGAGGAGGTCCGGAGACTGCAGCAGGCCCAGGCTGAAGCCCAGAGGGAACATGAAGGAGCCGTGCAGCTGCTGGAGTCTACCTTGGATTCCATGCAGGCCCGGGTTCGAGAGCTCGAAGAACAGTGCCGCAGCCAAACCGAGCAGTTCAGCCTCCTGGCACAGGAACTCCAGGCTTTCCGCCTGCACCCGGGCCCCTTGGATCTGCTCACATCTGCCCTGGACTGTGGGAGCCTTGGAGACTGCCCACCACCCCCCTGCTGCTGCTCCATTCCCCAGCCTTGCCGGGGGTCTGGCCCCAAAGACCTTGACCTCCCGCCGGGCTCCCCTGGGCGCTGCACCCCAAAGTCTTCCGAGCCTGCCCCTGCCACTCTCACTGGGGTCCCTCGAAGGACAGCCAAGAAGGCAGAGTCTCTCTCCAACTCCTCCCACTCCGAGTCCATCCACAACAGCCCCAAGTCATGCCCTACACCTGAGGTGGACACAGCCAGTGAGGTAGAGGAGCTGGAGGCAGACAGTGTCTCCCTGCTCCCAGCTGCGCCAGAGGGCAGCCGGGGAGGAGCCAGGATCCAGGTCTTCCTAGCACGTTATAGCTACAACCCCTTTGAGGGTCCCAATGAGAATCCAGAAGCAGAGCTTCCGCTGACAGCTGGCGAGTACATCTACATCTATGGCAACATGGATGAGGATGGCTTTTTTGAAGGAGAGCTCATGGATGGCCGAAGGGGCCTGGTCCCTTCCAATTTTGTAGAGCGTGTGTCGGATGATGACCTCCTGACCTCCCTCCCTCCAGAGCTGGCCGATTTGTCCCACAGCTCAGGCCCTGAACTCAGTTTCCTGAGTGTAGGTGGGGGTGGCAGCAGTAGCGGGGGCCAAAGCAGTGTGGGAAGGAGCCAGCCCAGACCTGAGGAGGAGGATGCAGGGGACGAGCTCAGTCTGAGCCCATCACCGGAGGGCCTGGGCGAGCCTCCTGCCGTGCCTTACCCCCGCCGTCTGGTGGTCCTCAAGCAGCTGGCCCACAGCGTGGTGCTGGCCTGGGAGCCGCCTCCTGAGCAAGTGGAGCTACACGGCTTCCATATCTGTGTGAATGGGGAGCTGCGACAGGCCCTGGGGCCTGGGGCGCCACCCAAGGCCGTGCTGGAGAACCTGGACCTGTGGGCCGGGCCCCTTCACATTTCTGTCCAGGCCCTGACTAGCCGGGGCAGCTCTGACCCACTGCGCTGTTGCTTGGCGGTGGGTGCCCGGGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCCATCGGTTGACAGCCACATCTGCTGAGATCACCTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCATCTACCTCAATGGGGAAGAGTGCCCACCTGCCAGCCCCAGTACCTACTGGGCCACCTTCTGCCACTTACGGCCTGGCACACCCTATCAGGCCCAAGTGGAGGCTCAGCTCCCACCCCAAGGGCCCTGGGAACCAGGCTGGGAGAGGCTGGAGCAGCGGGCTGCCACCCTGCAGTTCACCACACTCCCAGCAGGCCCACCTGATGCCCCTCTGGATGTGCAGATCGAGCCTGGGCCCTCCCCTGGGATCTTGATCATCAGTTGGCTCCCAGTCACCATCGATGCTGCTGGCACATCCAACGGTGTCCGGGTCACAGGCTATGCCATCTACGCTGATGGGCAGAAGATCATGGAGGTGGCCTCACCCACGGCAGGCAGTGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTGTCGTGAGGTGGTCGTGCGCACCATGTCGCCCCACGGGGAGTCGGCGGACTCCATCCCGGCTCCTATCACTCCCGCCCTGGCTCCGGCCAGCCTGCCAGCCCGAGTCTCCTGCCCCTCACCGCACCCAAGCCCAGAGGCCAGAGCGCCCCTTGCTTCAGCCTCCCCAGGGCCTGGAGACCCCAGCTCTCCTCTCCAGCACCCTGCTCCCCTTGGAACTCAAGAGCCTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAGGACCCTCCAGCACCTTGCTCCCAGGAGGAGGCTGGGGCAGCAGTGCTGGGCACCTCAGAGGAGAGGACAGCCAGCACATCTACCCTGGGTGAGAAGGACCCTGGCCCCGCAGCTCCCTCACTGGCCAAGCAGGAGGCCGAGTGGACTGCAGGAGAGGCCTGTCCGGCCTCCAGCTCCACCCAGGGAGCACGGGCCCAGCAGGCGCCAAATACCGAGATGTGCCAAGGAGGAGACCCAGGGTCTGGGCTGAGGCCCAGGGCTGAGAAGGAGGACACAGCAGAGCTTGGGGTTCATCTGGTGAACTCCCTCGTGGACCACGGCCGCAACTCAGACCTGTCAGACATCCAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCAAGTCCCAGCCCGACCCCTTTTGTGAGACTGACAGCGATGAGGAGATCTTGGAGCAGATCCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAAGAAGCTCTTTAGCATCCCGGAGGAGGAGGAAGAGGAAGAGGAGGACGAGGAGGAGGAGAAGTCAGGGGCAGGCTGTTCTTCCCGAGACCCTGGCCCGCCTGAACCTGCATTGCTGGGGCTGGGCTGTGACAGTGGTCAGCCCCGAAGACCTGGCCAGTGTCCCTTGTCTCCTGAGTCCTCCAGGGCTGGAGACTGCCTGGAAGACATGCCTGGATTAGTTGGTGGAAGCAGCCGGAGGAGAGGAGGGGGCTCCCCTGAGAAGCCCCCAAGCCGCAGGCGGCCTCCAGATCCCCGAGAACACTGCAGCCGACTTCTCAGCAACAATGGGCCCCAGGCCTCTGGACGACTGGGCCCCACACGGGAGAGGGGTGGCCTCCCCGTAATTGAGGGCCCCAGGACTGGACTAGAGGCTAGCGGGAGAGGCCGGCTGGGCCCTTCCCGGAGGTGCTCCCGTGGCCGGGCGCTGGAGCCTGGCCTGGCCAGCTGCCTTTCCCCCAAGTGCTTGGAAATCAGCATTGAATATGATTCGGAGGATGAGCAGGAGGCGGGCAGCGGGGGCATCAGCATCACCAGCTCCTGCTACCCTGGAGATGGGGAGGCCTGGGGCACAGCAACTGTAGGAAGGCCCAGGGGGCCTCCGAAGGCCAATTCAGGCCCCAAGCCCTACCCACGCCTCCCAGCCTGGGAGAAAGGGGAACCAGAGCGGAGAGGCCGCAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCCGGGCAACAGAGACCGGAGAGGCCAGAGGGCAGGACGGCTCTGGGCGGAGGGGCCCCCAGAAGAGAGGTGTCCGAGTCCTCAGGCCAAGCACTGCAGAGCTAGTCCCTGCGAGGAGCCCCTCAGAAACACTGGCTTACCAGCACCTACCCGTCAGGATCTTTGTGGCTCTGTTTGACTATGACCCCGTGTCAATGTCGCCCAATCCTGATGCTGGAGAAGAAGAGCTTCCCTTCCGAGAGGGTCAGATCCTGAAGGTGTTTGGGGACAAGGATGCCGATGGCTTCTACCAGGGCGAAGGTGGGGGCCGGACAGGCTACATTCCCTGCAACATGGTGGCTGAGGTGGCTGTGGACAGCCCTGCTGGGAGACAGCAACTGCTCCAGCGGGGTTATTTGTCCCCAGATATTCTCCTTGAGGGCTCAGGGAATGGTCCGTTTGTGTACTCCACAGCCCACACAACTGGGCCTCCTCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGGAAGGCCCTGCCCAGCCCTGTCCAGGCCCCCCTAAGCTGGTCCCCTCTGCTGACCTGAAAGCTCCCCACTCCATGGTGGCTGCATTTGACTACAACCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGGCAGAGCTGCCCTTCCGGGCAGGGGATGTCATTACTGTGTTTGGGGGCATGGACGATGACGGTTTCTACTATGGGGAATTAAATGGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAGGGCCCTGGGCCTGAGGCAGGCGGCCTGGACAGGGAACCCAGGACACCCCAGGCTGAGAGTCAGAGAACGAGGAGGAGAAGAGTCCAGTGCTAG
Amino sequence
MEQLTTLPRPGDPGAMEPWALPTWHSWTPGRGGEPSSAAPSIADTPPAALQLQELRSEESSKPKGDGSSRPVGGTDPEGAEACLPSLGQQASSSGPACQRPEDEEVEAFLKAKLNMSFGDRPNLELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQETNLRVVSAPLPRPGTSLELCRKALARQRARDLSETASALLAKDKQIAALQRECRELQARLTLVGKEGPQWLHVRDFDRLLRESQREVLRLQRQIALRNQRETLPLPPSWPPGPALQARAGAPAPGAPGEATPQEDADNLPVILGEPEKEQRVQQLESELSKKRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQEEVRRLQQAQAEAQREHEGAVQLLESTLDSMQARVRELEEQCRSQTEQFSLLAQELQAFRLHPGPLDLLTSALDCGSLGDCPPPPCCCSIPQPCRGSGPKDLDLPPGSPGRCTPKSSEPAPATLTGVPRRTAKKAESLSNSSHSESIHNSPKSCPTPEVDTASEVEELEADSVSLLPAAPEGSRGGARIQVFLARYSYNPFEGPNENPEAELPLTAGEYIYIYGNMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLLTSLPPELADLSHSSGPELSFLSVGGGGSSSGGQSSVGRSQPRPEEEDAGDELSLSPSPEGLGEPPAVPYPRRLVVLKQLAHSVVLAWEPPPEQVELHGFHICVNGELRQALGPGAPPKAVLENLDLWAGPLHISVQALTSRGSSDPLRCCLAVGARAGVVPSQLRVHRLTATSAEITWVPGNSNLAHAIYLNGEECPPASPSTYWATFCHLRPGTPYQAQVEAQLPPQGPWEPGWERLEQRAATLQFTTLPAGPPDAPLDVQIEPGPSPGILIISWLPVTIDAAGTSNGVRVTGYAIYADGQKIMEVASPTAGSVLVELSQLQLLQVCREVVVRTMSPHGESADSIPAPITPALAPASLPARVSCPSPHPSPEARAPLASASPGPGDPSSPLQHPAPLGTQEPPGAPPASPSREMAKGSHEDPPAPCSQEEAGAAVLGTSEERTASTSTLGEKDPGPAAPSLAKQEAEWTAGEACPASSSTQGARAQQAPNTEMCQGGDPGSGLRPRAEKEDTAELGVHLVNSLVDHGRNSDLSDIQEEEEEEEEEEEEELGSRTCSFQKQVAGNSIRENGAKSQPDPFCETDSDEEILEQILELPLQQFCSKKLFSIPEEEEEEEEDEEEEKSGAGCSSRDPGPPEPALLGLGCDSGQPRRPGQCPLSPESSRAGDCLEDMPGLVGGSSRRRGGGSPEKPPSRRRPPDPREHCSRLLSNNGPQASGRLGPTRERGGLPVIEGPRTGLEASGRGRLGPSRRCSRGRALEPGLASCLSPKCLEISIEYDSEDEQEAGSGGISITSSCYPGDGEAWGTATVGRPRGPPKANSGPKPYPRLPAWEKGEPERRGRSATGRAKEPLSRATETGEARGQDGSGRRGPQKRGVRVLRPSTAELVPARSPSETLAYQHLPVRIFVALFDYDPVSMSPNPDAGEEELPFREGQILKVFGDKDADGFYQGEGGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGYLSPDILLEGSGNGPFVYSTAHTTGPPPKPRRSKKAESEGPAQPCPGPPKLVPSADLKAPHSMVAAFDYNPQESSPNMDVEAELPFRAGDVITVFGGMDDDGFYYGELNGQRGLVPSNFLEGPGPEAGGLDREPRTPQAESQRTRRRRVQC*