ENST00000306317.7 LGI3

Information
Transcript ID
ENST00000306317.7
Genome
hg38
Position
chr8:22,146,830-22,156,806
Strand
-
CDS length
1,647
Amino acid length
549
Gene symbol
LGI3
Gene type
protein-coding
Gene description
leucine rich repeat LGI family member 3
Gene Entrez Gene ID
203190
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 22,146,830 22,148,977
7 22,151,489 22,151,653
6 22,151,831 22,152,000
5 22,153,968 22,154,039
4 22,154,142 22,154,213
3 22,154,560 22,154,631
2 22,155,392 22,155,463
1 22,156,337 22,156,806
CDS
Exon number Type Start Stop
8 CDS 22,148,160 22,148,977
7 CDS 22,151,489 22,151,653
6 CDS 22,151,831 22,152,000
5 CDS 22,153,968 22,154,039
4 CDS 22,154,142 22,154,213
3 CDS 22,154,560 22,154,631
2 CDS 22,155,392 22,155,463
1 CDS 22,156,337 22,156,542
Other genome
Genome Chromosome Start End Links
hg19 chr8 22,004,343 22,014,319 Link
CDS sequence
ATGGCGGGGCTGCGGGCCAGGGGGGGCCCGGGGCCGGGGCTGCTGGCGCTCTCCGCGCTCGGCTTCTGCCTCATGCTGCAAGTCAGCGCTAAGAGGCCCCCCAAGACGCCCCCCTGCCCGCCCAGCTGCTCTTGCACCAGGGACACCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGGAACCTGCCCTCGGAGGTCATCTCCCTGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTTACTCAACTCCAACAAGTTTACACTGATTGGAGACAACGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTTCATTGAGAACAATGACATCTGGGCACTATCCAAGTTCACCTTCCGAGGACTCAAGTCCTTGACTCACCTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCCCCTGGACATCCTGAATGACTTGGACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGTGAAGTGGTTGGTGGAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAGCACAAGGTGCAGGACCTGCCGCTGCGGGAGTTCGATTGCATCACCACAGATTTTGTGTTGTACCAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAGCCCTTCCTCTACTCCAGTGACCTCTATTTGGCTCTGGCCCAGCCAGGAGTCAGTGCCTGCACCATCCTGAAGTGGGACTATGTTGAGCGGCAGCTTCGAGACTATGATAGAATCCCAGCCCCCTCTGCAGTGCACTGCAAGCCGATGGTGGTGGACAGCCAGCTGTACGTGGTCGTGGCCCAGCTGTTTGGCGGCTCTTACATTTACCACTGGGATCCCAACACCACGCGCTTCACCAGGCTGCAAGACATTGACCCGCAGCGCGTGCGCAAGCCTAACGACCTAGAAGCCTTCCGCATCGACGGTGACTGGTACTTTGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGCACCAGAATGGCTTCTACTCCCACCAGGCACTGCACCCCTGGCACCGTGACACCGACCTGGAGTTTGTGGACGGCGAGGGCAAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCGTCATCTATCAGTGGAGTCGCACCCAGAAGCAGTTTGTGGCCCAGGGTGAGGTGACCCAGGTGCCTGATGCCCAAGCTGTGAAACACTTTCGTGCCGGCCGCGACAGCTACCTGTGCCTCAGCCGCTACATTGGCGACTCCAAGATCCTGCGCTGGGAGGGTACCCGCTTCTCGGAGGTGCAGGCCCTGCCCTCCCGGGGCTCGCTGGCCCTGCAGCCCTTCCTTGTGGGTGGCCGCCGCTACCTGGCACTGGGCAGTGATTTCTCCTTCACCCAGATCTACCAGTGGGATGAGGGACGACAGAAGTTTGTACGGTTCCAGGAGCTGGCTGTGCAGGCTCCTCGGGCCTTCTGCTACATGCCTGCTGGGGACGCCCAGCTACTCCTGGCCCCCAGCTTCAAGGGACAGACGCTGGTGTATAGACACATTGTGGTGGATCTCAGTGCCTAG
Amino sequence
MAGLRARGGPGPGLLALSALGFCLMLQVSAKRPPKTPPCPPSCSCTRDTAFCVDSKAVPRNLPSEVISLTLVNAAFSEIQDGAFSHLPLLQFLLLNSNKFTLIGDNAFTGLSHLQYLFIENNDIWALSKFTFRGLKSLTHLSLANNNLQTLPRDIFRPLDILNDLDLRGNSLNCDCKVKWLVEWLAHTNTTVAPIYCASPPRFQEHKVQDLPLREFDCITTDFVLYQTLAFPAVSAEPFLYSSDLYLALAQPGVSACTILKWDYVERQLRDYDRIPAPSAVHCKPMVVDSQLYVVVAQLFGGSYIYHWDPNTTRFTRLQDIDPQRVRKPNDLEAFRIDGDWYFAVADSSKAGATSLYRWHQNGFYSHQALHPWHRDTDLEFVDGEGKPRLIVSSSSQAPVIYQWSRTQKQFVAQGEVTQVPDAQAVKHFRAGRDSYLCLSRYIGDSKILRWEGTRFSEVQALPSRGSLALQPFLVGGRRYLALGSDFSFTQIYQWDEGRQKFVRFQELAVQAPRAFCYMPAGDAQLLLAPSFKGQTLVYRHIVVDLSA*