ENST00000409701.5 CHST10
Information
- Transcript ID
- ENST00000409701.5
- Genome
- hg38
- Position
- chr2:100,393,245-100,417,011
- Strand
- -
- CDS length
- 1,071
- Amino acid length
- 357
- Gene symbol
- CHST10
- Gene type
- protein-coding
- Gene description
- carbohydrate sulfotransferase 10
- Gene Entrez Gene ID
- 9486
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 100,393,245 | 100,393,782 |
| 6 | 100,395,509 | 100,395,614 |
| 5 | 100,397,908 | 100,398,142 |
| 4 | 100,402,564 | 100,402,655 |
| 3 | 100,406,576 | 100,406,707 |
| 2 | 100,415,041 | 100,415,111 |
| 1 | 100,416,848 | 100,417,011 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 100,393,245 | 100,393,782 |
| 6 | CDS | 100,395,509 | 100,395,614 |
| 5 | CDS | 100,397,908 | 100,398,142 |
| 4 | CDS | 100,402,564 | 100,402,655 |
| 3 | CDS | 100,406,576 | 100,406,675 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 101,009,707 | 101,033,473 | Link |
CDS sequence
ATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTTTTGGGTGATTTTCATGTTCATGGTGGCTAGCAAGTTCATCACGTTGACCTTTAAAGACCCAGATGTGTACAGTGCCAAACAGGAGTTTCTGTTCCTGACAACCATGCCGGAAGTGAGGAAGTTGCCAGAAGAGAAGCACATTCCTGAGGAACTGAAGCCAACTGGGAAGGAGCTTCCAGACAGCCAGCTCGTTCAGCCCCTGGTCTACATGGAGCGCCTGGAACTCATCAGAAACGTCTGCAGGGATGATGCCCTGAAGAATCTCTCGCACACTCCTGTCTCCAAGTTTGTCCTGGACCGAATATTTGTCTGTGACAAGCACAAGATTCTTTTCTGCCAGACTCCCAAAGTGGGCAACACCCAGTGGAAGAAAGTGCTGATTGTTCTAAATGGAGCATTTTCTTCCATTGAGGAGATCCCCGAAAACGTGGTGCACGACCACGAGAAGAACGGCCTTCCTCGGCTCTCTTCCTTCAGTGATGCAGAAATTCAGAAGCGATTGAAAACATACTTCAAGTTTTTTATTGTAAGAGATCCCTTCGAAAGACTTATTTCTGCATTTAAGGATAAATTTGTTCACAATCCCCGGTTTGAGCCTTGGTACAGGCATGAGATTGCTCCTGGCATCATCAGAAAATACAGGAGGAACCGGACAGAGACCCGGGGGATCCAGTTTGAAGATTTCGTGCGCTACCTCGGCGATCCGAACCACAGATGGCTAGACCTTCAGTTTGGGGACCACATCATTCACTGGGTGACGTATGTAGAGCTCTGTGCTCCCTGTGAGATAATGTACAGTGTGATTGGACACCACGAGACCCTGGAGGACGATGCCCCATACATCTTAAAAGAGGCTGGCATTGACCACCTGGTGTCATACCCGACTATCCCTCCGGGCATTACCGTGTATAACAGAACCAAGGTGGAGCACTATTTCCTGGGCATCAGCAAACGAGACATCCGACGCCTGTATGCCCGTTTCGAAGGGGACTTTAAGCTCTTTGGGTACCAGAAACCAGACTTTTTGCTAAACTAA
Amino sequence
MHHQWLLLAACFWVIFMFMVASKFITLTFKDPDVYSAKQEFLFLTTMPEVRKLPEEKHIPEELKPTGKELPDSQLVQPLVYMERLELIRNVCRDDALKNLSHTPVSKFVLDRIFVCDKHKILFCQTPKVGNTQWKKVLIVLNGAFSSIEEIPENVVHDHEKNGLPRLSSFSDAEIQKRLKTYFKFFIVRDPFERLISAFKDKFVHNPRFEPWYRHEIAPGIIRKYRRNRTETRGIQFEDFVRYLGDPNHRWLDLQFGDHIIHWVTYVELCAPCEIMYSVIGHHETLEDDAPYILKEAGIDHLVSYPTIPPGITVYNRTKVEHYFLGISKRDIRRLYARFEGDFKLFGYQKPDFLLN*