ENST00000416608.5 OCM
Information
- Transcript ID
- ENST00000416608.5
- Genome
- hg38
- Position
- chr7:5,879,827-5,886,242
- Strand
- +
- CDS length
- 330
- Amino acid length
- 110
- Gene symbol
- OCM
- Gene type
- protein-coding
- Gene description
- oncomodulin
- Gene Entrez Gene ID
- 654231
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 5,879,827 | 5,879,963 |
| 2 | 5,880,887 | 5,880,950 |
| 3 | 5,882,493 | 5,882,625 |
| 4 | 5,883,890 | 5,883,999 |
| 5 | 5,886,064 | 5,886,242 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 5,880,890 | 5,880,950 |
| 3 | CDS | 5,882,493 | 5,882,625 |
| 4 | CDS | 5,883,890 | 5,883,999 |
| 5 | CDS | 5,886,064 | 5,886,089 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr7 | 5,919,458 | 5,925,873 | Link |
CDS sequence
ATGAGCATCACGGACGTGCTCAGTGCTGACGACATTGCAGCAGCGCTCCAGGAATGCCGAGACCCAGACACTTTTGAACCCCAAAAATTCTTCCAGACATCAGGCCTCTCCAAGATGTCAGCCAATCAGGTGAAGGATGTTTTCCGGTTCATAGACAACGACCAGAGCGGGTACCTGGATGAAGAAGAGCTTAAGTTTTTCCTCCAGAAGTTTGAGAGTGGTGCCAGAGAACTGACCGAGTCAGAAACCAAGTCCTTGATGGCTGCGGCGGATAATGATGGAGATGGGAAAATTGGAGCAGAGGAATTCCAGGAAATGGTGCATTCTTAA
Amino sequence
MSITDVLSADDIAAALQECRDPDTFEPQKFFQTSGLSKMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVHS*