ENST00000421612.6 ZSCAN18
Information
- Transcript ID
- ENST00000421612.6
- Genome
- hg38
- Position
- chr19:58,084,438-58,098,228
- Strand
- -
- CDS length
- 1,125
- Amino acid length
- 375
- Gene symbol
- ZSCAN18
- Gene type
- protein-coding
- Gene description
- zinc finger and SCAN domain containing 18
- Gene Entrez Gene ID
- 65982
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
6 | 58,084,438 | 58,085,376 |
5 | 58,086,174 | 58,086,266 |
4 | 58,086,906 | 58,087,008 |
3 | 58,087,316 | 58,087,404 |
2 | 58,088,688 | 58,088,837 |
1 | 58,098,115 | 58,098,228 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
6 | CDS | 58,084,685 | 58,085,376 |
5 | CDS | 58,086,174 | 58,086,266 |
4 | CDS | 58,086,906 | 58,087,008 |
3 | CDS | 58,087,316 | 58,087,404 |
2 | CDS | 58,088,688 | 58,088,835 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr19 | 58,595,805 | 58,609,595 | Link |
CDS sequence
ATGCTGCTGGGCTCCCCTGCGGGCTCATCCTCAATTCTTAGCGATGGAGTGTACGAGAGGCACATGGACCCTCTGCTGCTACCAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGGGGAGATCCCGGCACCTTCTGAGACACCCTGGCTTTCTCCGGACCCCCTGTTTCTGGAACAGAGGAGGGTCAGAGAAGCAAAGACCGAAGAGGACGGCCCTGCCAACACCGAGCAGAAGCTGAAGTCCTTTCCAGAGGACCCTCAGCACCTGGGGGAGTGGGGCCACCTGGACCCTGCCGAGGAGAACCTGAAGAGCTACCGGAAGCTGCTCCTGTGGGGGTATCAGCTTTCCCAGCCTGACGCTGCCTCCAGGCTGGACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGCGGGAGGCGGCAGGAGAGCGCTGGGTGCGCCTGCGAGGAGGCCGCCCCCGCGGGGGTGCTGCCTGAGCTGCCTACGGAGGCGCCCCCTGGGGACGCCCTTGCCGATCCCCCGTCGGGCACCACTGAGGAGGAGGAAGAGCAGCCTGGGAAGGCCCCGGACCCGCAGGACCCCCAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACTGGGAACCAAGAGGCCGCACCCCGAGGATGGGGACGGGCAGAGCCTCGAGGGCGTCTCTAGCTCCGGCGACAGCGCAGGGCTGGAGGCCGGGCAGGGCCCTGGGGCTGACGAGCCGGGCTTGTCCCGCGGGAAGCCCTATGCCTGCGGCGAGTGCGGGGAGGCCTTCGCGTGGCTCTCGCACCTGATGGAGCACCACAGCAGCCATGGCGGCCGGAAGCGCTACGCCTGTCAGGGCTGCTGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGAAGGAGAAAAGCTACGCGCTGGGGGGCGCCCGGGGCCCCCAACCGTCCACCCGCGAAGCCCAGGCGGGGGCTAGGGCGGGCGGTCCCCCAGAGAGCGTGGAGGGCGAGGCTCCCCCCGCACCCCCAGAGGCGCAGAGGTGA
Amino sequence
MLLGSPAGSSSILSDGVYERHMDPLLLPGELASPSQALGAGEIPAPSETPWLSPDPLFLEQRRVREAKTEEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLWGYQLSQPDAASRLDTEELRLVERDPQGSSLPGGRRQESAGCACEEAAPAGVLPELPTEAPPGDALADPPSGTTEEEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGDGQSLEGVSSSGDSAGLEAGQGPGADEPGLSRGKPYACGECGEAFAWLSHLMEHHSSHGGRKRYACQGCWKTFHFSLALAEHQKTHEKEKSYALGGARGPQPSTREAQAGARAGGPPESVEGEAPPAPPEAQR*