ENST00000486479.3 SUPT20HL2
Information
- Transcript ID
- ENST00000486479.3
- Genome
- hg38
- Position
- chrX:24,308,210-24,314,069
- Strand
- -
- CDS length
- 2,454
- Amino acid length
- 818
- Gene symbol
- SUPT20HL2
- Gene type
- protein-coding
- Gene description
- SUPT20H like 2
- Gene Entrez Gene ID
- 170067
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 24,308,210 | 24,314,069 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 24,310,862 | 24,313,315 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 24,326,327 | 24,332,186 | Link |
CDS sequence
ATGGATCGAGATTTAGAACAGGCTCTGGATCGCACAGAGAATATCACTGAAATTGCCCAACAGAGACGTCCTAGAAGGAGATACTCACCTAGGGCGGGAAAAACTCTGCAGGAAAAACTTTATGACATTTATGTTGAAGAATGTGGAAAAGAGCCTGAGGATCCTCAGGAATTGAGAAGCAATGTAAACTTGTTAGAAAAGCTTGTTAGGAGAGAGTCCTTGCCATGTTTACTGGTCAATCTATACCCAGGCAATCAGGGGTATTCTGTGATGCTCCAGAGAGAAGATGGGTCCTTTGCAGAGACCATTCGGCTGCCTTATGAAGAAAGGGCATTGCTGGACTACTTGGATGCAGAAGAATTACCCCCTGCTTTGGGTGATGTCCTGGATAAAGCTTCGGTTAACATTTTTCATAGTGGGTGTGTCATAGTAGAAGTTCGTGACTACAGGCAGTCCAGTAATATGCAACCTCCTGGTTACCAAAGCAGGCATATTCTTCTACGTCCAACCATGCAGACTTTAGCCCCTGAGGTGAAGACGATGACAAGAGATGGCGAGAAATGGAGCCAGGAAGACAAATTTCCTCTTGAGAGTCAACTGATCTTAGCGACAGCTGAACCACTGTGTCTTGATCCTTCTGTAGCAGTTGCCTGCACTGCAAACAGGCTGCTGTACAACAAGCAAAAGATGAATACCGACCCGATGGAACAGTGCCTCCAGAGGTATTCGTGGCCCTCTGTAAAGCCACAGCAGGAGCAGTCTGACTGTCCACCTCCTCCTGAGCTGAGAGTGTCGACTTCTGGCCAAAAAGAAGAAAGAAAAGTAGGTCAGCCTTGTGAGCTGAACATTACTAAAGCGGGAAGTTGTGTAGACACGTGGAAAGGCAGACCCTGTGATTTGGCCGTGCCTTCAGAAGTGGATGTGGAGAAACTTGCTAAAGGGTATCAGTCCGTCACAGCTGCTGACCCACAGCTCCCAGTCTGGCCAGCCCAGGAGGTAGAAGACCCTTTCAGACATGCATGGGAAGCTGGCTGTCAGGCCTGGGACACCAAGCCAAACATCATGCAGTCGTTTAATGATCCGCTTCTCTGTGGTAAAATACGGCCACGTAAAAAAGCCAGGCAGAAGAGCCAGAAGTCTCCCTGGCAGCCCTTCCCAGATGACCATTCAGCTTGTCTCAGGCCTGGGTCAGAGACTGATGCTGGGAGGGCAGTGAGTCAGGCCCAGGAATCGGTGCAGAGCAAAGTCAAAGGTCCAGGCAAGATGTCACACAGCTCCAGTGGCCCAGCCAGTGTCAGTCAGCTCTCTTCATGGAAAACACCAGAACAGCCTGATCCTGTGTGGGTCCAGTCTTCAGTATCCGGGAAGGGAGAGAAACATCCACCTCCCCGCACCCAACTTCCCTCAAGCTCAGGAAAGATTTCCTCAGGTAACAGTTTTCCCCCACAACAGGCAGGCAGCCCTCTTAAGCGTCCATTTCCTGCTGCTGCTCCTGCTGTAGCTGCTGCTGCTCCTGCTCCTGCTCCTGCTCCTGCTGCTGCTCCTGCTTTAGCTGCTGCTGCTGTGGCGGCGGCGGCCGGTGGGGCGGCACCAAGCCATTCTCAGAAGCCCTCTGTGCCTCTTATTAAAGCTAGCAGGCGCCGTCCAGCTGCCGGGCGCCCCACCAGATTCGTAAAAATAGCCCCAGCCATTCAGGTCCGGACAGGCTCCACTGGCCTAAAGGCCACCAACGTGGAGGGCCCAGTCCGGGGAGCCCAGGTTTTGGGGTGCAGTTTCAAGCCTGTGCAGGCCCCTGGCTCGGGTGCCCCCGCTCCTGCAGGAATCAGTGGCAGTGGCCTTCAGTCCTCAGGAGGTCCACTACCAGATGCAAGGCCCGGTGCAGTGCAGGCATCTTCTCCAGCACCCCTTCAGTTTTTCCTAAATACTCCGGAAGGTCTCAGGCCTCTGACACTCCAGGTTCCGCAGGGCTGGGCGGTTCTGACCGGCCCGCAGCAGCAGTCCCATCAGCTGGTTTCCCTGCAGCAGCTCCAGCAGCCCACAGCTGCTCACCCTCCTCAGCCAGGGCCACAGGGTTCCACACTAGGTTTGAGCACGCAAGGGCAGGCCTTCCCTGCTCAGCAACTTCTTAATGTGAACCTCACTGGAGCAGGTAGTGGTCTGCAGCCCCAGCCCCAGGCTGCTGTGTTGAGTCTGCTTGGCTCTGCCCAGGTTCCTCAGCAGGGTGTCCAGCTCCCCTTTGTCTTGGGGCAGCAGCCACAGCCGCTGCTGCTGCTGCAGCCACAACCACAGCCACAGCAGATCCAGCTCCAGACACAGCCTTTGAGAGTCCTGCAGCAGCCAGTGTTTTTGGCAACAGGCGCTGTTCAGATAGTGCAGCCACATCCAGGTGTGCAAGCAGGGAGCCAGTTGGTAGGTCAGAGGAAGGGAGGCAAGCCAACCCCTCCAGCTCCCTGA
Amino sequence
MDRDLEQALDRTENITEIAQQRRPRRRYSPRAGKTLQEKLYDIYVEECGKEPEDPQELRSNVNLLEKLVRRESLPCLLVNLYPGNQGYSVMLQREDGSFAETIRLPYEERALLDYLDAEELPPALGDVLDKASVNIFHSGCVIVEVRDYRQSSNMQPPGYQSRHILLRPTMQTLAPEVKTMTRDGEKWSQEDKFPLESQLILATAEPLCLDPSVAVACTANRLLYNKQKMNTDPMEQCLQRYSWPSVKPQQEQSDCPPPPELRVSTSGQKEERKVGQPCELNITKAGSCVDTWKGRPCDLAVPSEVDVEKLAKGYQSVTAADPQLPVWPAQEVEDPFRHAWEAGCQAWDTKPNIMQSFNDPLLCGKIRPRKKARQKSQKSPWQPFPDDHSACLRPGSETDAGRAVSQAQESVQSKVKGPGKMSHSSSGPASVSQLSSWKTPEQPDPVWVQSSVSGKGEKHPPPRTQLPSSSGKISSGNSFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPAAAPALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRRPAAGRPTRFVKIAPAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKPVQAPGSGAPAPAGISGSGLQSSGGPLPDARPGAVQASSPAPLQFFLNTPEGLRPLTLQVPQGWAVLTGPQQQSHQLVSLQQLQQPTAAHPPQPGPQGSTLGLSTQGQAFPAQQLLNVNLTGAGSGLQPQPQAAVLSLLGSAQVPQQGVQLPFVLGQQPQPLLLLQPQPQPQQIQLQTQPLRVLQQPVFLATGAVQIVQPHPGVQAGSQLVGQRKGGKPTPPAP*