ENST00000409987.5 LSM5

Information
Transcript ID
ENST00000409987.5
Genome
hg38
Position
chr7:32,487,035-32,490,380
Strand
-
CDS length
195
Amino acid length
65
Gene symbol
LSM5
Gene type
protein-coding
Gene description
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
Gene Entrez Gene ID
23658
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 32,487,035 32,487,293
3 32,487,685 32,487,757
2 32,489,234 32,489,344
1 32,490,320 32,490,380
CDS
Exon number Type Start Stop
3 CDS 32,487,720 32,487,757
2 CDS 32,489,234 32,489,344
1 CDS 32,490,320 32,490,365
Other genome
Genome Chromosome Start End Links
hg19 chr7 32,526,647 32,529,992 Link
CDS sequence
ATGGCGGCTAACGCTACTACCAACCCGTCGCAGCTGCTGCCCTTAGAGCTTGTGGACAAATGTATAGGATCAAGAATTCACATCGTGATGAAGAGTGATAAGGAAATTGTTGGTACTCTTCTAGGATTTGATGACTTTGTCAGTATCCTTTTAAAAGTGAAATCACACCAGAAGGAAGAAGGATTACTAAATTAG
Amino sequence
MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVSILLKVKSHQKEEGLLN*