ENST00000479072.5 PGAP2

Information
Transcript ID
ENST00000479072.5
Genome
hg38
Position
chr11:3,808,594-3,825,578
Strand
+
CDS length
285
Amino acid length
95
Gene symbol
PGAP2
Gene type
protein-coding
Gene description
post-GPI attachment to proteins 2
Gene Entrez Gene ID
27315
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 3,808,594 3,808,651
2 3,823,613 3,823,740
3 3,823,883 3,824,135
4 3,824,270 3,824,364
5 3,825,020 3,825,128
6 3,825,328 3,825,578
CDS
Exon number Type Start Stop
4 CDS 3,824,320 3,824,364
5 CDS 3,825,020 3,825,128
6 CDS 3,825,328 3,825,458
Other genome
Genome Chromosome Start End Links
hg19 chr11 3,829,824 3,846,808 Link
CDS sequence
ATGCTCCTCACCTGCATTCTCTGGCGGTTGACCAAGAAGCACACAGATCGCAAGTCCTACAGCTGGAAACAGCGGCTCTTCATCATCAACTTCATCTCCTTCTTCTCGGCGCTGGCTGTCTACTTTCGGCACAACATGTATTGTGAGGCTGGAGTGTACACCATCTTTGCCATCCTGGAGTACACTGTTGTCTTAACCAACATGGCGTTCCACATGACGGCCTGGTGGGACTTCGGGAACAAGGAGCTGCTCATAACCTCTCAGCCTGAGGAAAAGCGATTCTGA
Amino sequence
MLLTCILWRLTKKHTDRKSYSWKQRLFIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLITSQPEEKRF*