ENST00000306149.12 CSDC2

Information
Transcript ID
ENST00000306149.12
Genome
hg38
Position
chr22:41,561,010-41,576,666
Strand
+
CDS length
462
Amino acid length
154
Gene symbol
CSDC2
Gene type
protein-coding
Gene description
cold shock domain containing C2
Gene Entrez Gene ID
27254
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 41,561,010 41,561,183
2 41,571,843 41,572,141
3 41,573,655 41,573,777
4 41,574,733 41,576,666
CDS
Exon number Type Start Stop
2 CDS 41,571,966 41,572,141
3 CDS 41,573,655 41,573,777
4 CDS 41,574,733 41,574,895
Other genome
Genome Chromosome Start End Links
hg19 chr22 41,957,014 41,972,670 Link
CDS sequence
ATGACTTCAGAGTCGACGTCACCCCCAGTTGTGCCCCCGCTCCACTCCCCCAAGTCCCCAGTCTGGCCCACCTTCCCCTTCCACAGGGAGGGCAGCAGGGTCTGGGAGCGGGGTGGTGTCCCACCTCGGGACCTACCCAGCCCTCTGCCCACCAAGCGGACCAGGACCTATTCAGCGACAGCCCGGGCCTCAGCTGGCCCCGTGTTCAAGGGCGTCTGTAAGCAGTTCTCACGCTCACAGGGCCATGGCTTCATCACCCCCGAGAACGGGTCCGAGGACATCTTCGTACATGTGTCTGACATCGAGGGGGAGTACGTGCCAGTGGAGGGCGACGAGGTGACCTACAAGATGTGCCCTATCCCTCCCAAGAACCAGAAGTTCCAGGCCGTGGAGGTGGTGCTCACTCAGCTGGCCCCCCACACTCCCCACGAGACGTGGTCTGGCCAGGTCGTGGGCTCCTAG
Amino sequence
MTSESTSPPVVPPLHSPKSPVWPTFPFHREGSRVWERGGVPPRDLPSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPIPPKNQKFQAVEVVLTQLAPHTPHETWSGQVVGS*