ENST00000399001.5 VPS26C

Information
Transcript ID
ENST00000399001.5
Genome
hg38
Position
chr21:37,225,299-37,267,351
Strand
-
CDS length
519
Amino acid length
173
Gene symbol
VPS26C
Gene type
protein-coding
Gene description
VPS26 endosomal protein sorting factor C
Gene Entrez Gene ID
10311
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 37,225,299 37,225,626
4 37,227,654 37,227,806
3 37,228,223 37,228,373
2 37,232,377 37,232,451
1 37,267,238 37,267,351
CDS
Exon number Type Start Stop
5 CDS 37,225,544 37,225,626
4 CDS 37,227,654 37,227,806
3 CDS 37,228,223 37,228,373
2 CDS 37,232,377 37,232,451
1 CDS 37,267,238 37,267,294
Other genome
Genome Chromosome Start End Links
hg19 chr21 38,597,600 38,639,652 Link
CDS sequence
ATGGGGACCGCCCTGGACATCAAGATTAAAAGAGCGAATAAAGTTTATCACGCCGGGCCTCAGAAGGGGAAGTTTACTCCCAGTCCCGTGGACTTCACGATTACACCTGAAACCTTACAGAACGTCAAAGAGAGAGCTTTGCTTCCCAAATTTCTCCTTCGAGGACATCTCAACTCAACAAACTGTGTCATCACGCAGCCACTAACGGGAGAGCTGGTGGTGGAGAGCTCGGAAGCCGCCATCAGAAGCGTGGAGCTGCAGCTGGTGCGCGTGGAGACGTGCGGGTGTGCAGAAGGCTATGCCCGCGACGCCACGGAGATTCAGAACATTCAGATCGCCGACGGGGATGTGTGCAGGGGCCTCTCTGTCCCCATCTACATGGTCTTCCCTAGGCTGTTCACCTGCCCTACACTGGAGACCACCAACTTCAAAGTGGAATTTGAGGTTAACATCGTGGTGCTGCTTCACCCTGACCACCTCATCACGGAGAACTTCCCGCTGAAGCTCTGCAGGATATAG
Amino sequence
MGTALDIKIKRANKVYHAGPQKGKFTPSPVDFTITPETLQNVKERALLPKFLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKVEFEVNIVVLLHPDHLITENFPLKLCRI*