ENST00000665583.1 SCML2
Information
- Transcript ID
- ENST00000665583.1
- Genome
- hg38
- Position
- chrX:18,241,123-18,288,865
- Strand
- -
- CDS length
- 1,038
- Amino acid length
- 346
- Gene symbol
- SCML2
- Gene type
- protein-coding
- Gene description
- Scm polycomb group protein like 2
- Gene Entrez Gene ID
- 10389
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 18,241,123 | 18,241,379 |
| 7 | 18,246,577 | 18,246,828 |
| 6 | 18,247,769 | 18,247,882 |
| 5 | 18,256,848 | 18,257,030 |
| 4 | 18,258,044 | 18,258,247 |
| 3 | 18,260,171 | 18,260,291 |
| 2 | 18,265,585 | 18,265,802 |
| 1 | 18,288,701 | 18,288,865 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 18,241,372 | 18,241,379 |
| 7 | CDS | 18,246,577 | 18,246,828 |
| 6 | CDS | 18,247,769 | 18,247,882 |
| 5 | CDS | 18,256,848 | 18,257,030 |
| 4 | CDS | 18,258,044 | 18,258,247 |
| 3 | CDS | 18,260,171 | 18,260,291 |
| 2 | CDS | 18,265,585 | 18,265,740 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 18,259,243 | 18,306,985 | Link |
CDS sequence
ATGCAGTCTCCACAGAAAACTACTCTAATATTACCAACACAGCAGGTCAGGAGATCAAGTCGAATTAAACCACCTGGACCTACTGCAGTCCCCAAAAGGAGCAGTTCTGTTAAAAATATCACACCAAGGAAAAAAGGTCCAAACTCAGGAAAAAAGGAAAAACCTTTGCCCGTGATATGTTCTACATCTGCAGCTTCTCTAAAATCGCTGACCAGAGACCGTGGCATGTTATATAAAGATGTCGCTTCTGGGCCATGTAAAATAGTGATGTCTACAGTCTGTGTCTATGTAAACAAACATGGAAACTTTGGCCCTCATCTGGATCCCAAGAGAATCCAGCAGCTGCCTGACCACTTCGGCCCGGGCCCGGTGAATGTGGTGCTTCGCCGGATTGTGCAGGCCTGTGTGGATTGTGCCCTTGAAACTAAAACTGTTTTTGGATACCTGAAGCCAGATAATCGTGGAGGAGAAGTGATAACTGCCTCCTTTGATGGGGAAACTCATTCCATCCAGCTCCCTCCAGTGAACAGTGCATCATTTGCTCTTCGCTTTCTTGAGAACTTCTGCCACAGTCTGCAGTGTGATAACCTTTTGAGTAGCCAGCCTTTTAGTTCTTCCAGGGGTCATACTCACAGCTCTGCAGAGCATGATAAAAATCAGTCAGCAAAAGAAGATGTAACAGAAAGGCAAAGCACCAAACGATCTCCTCAGCAAACTGTACCATATGTTGTTCCTCTCTCTCCTAAGCTCCCCAAAACAAAGGAGTATGCGTCTGAAGGAGAACCATTGTTTGCTGGGGGAAGTGCCATTCCCAAAGAGGAGAATCTTTCAGAAGATTCTAAGAGCTCATCACTAAATTCAGGAAATTATTTGAATCCTGCCTGTAGAAATCCTATGTATATTCATACTTCAGTCTCCCAGGATTTTTCTCGAAGTGTGCCAGGCACCACAAGTTCACCACTAGTTGGGGACATATCCCCCAAGAGCAGTCCCCATGAAGTTAAATTCCAAATGCAGAGGAAAAGTGAAGGAAATTGA
Amino sequence
MQSPQKTTLILPTQQVRRSSRIKPPGPTAVPKRSSSVKNITPRKKGPNSGKKEKPLPVICSTSAASLKSLTRDRGMLYKDVASGPCKIVMSTVCVYVNKHGNFGPHLDPKRIQQLPDHFGPGPVNVVLRRIVQACVDCALETKTVFGYLKPDNRGGEVITASFDGETHSIQLPPVNSASFALRFLENFCHSLQCDNLLSSQPFSSSRGHTHSSAEHDKNQSAKEDVTERQSTKRSPQQTVPYVVPLSPKLPKTKEYASEGEPLFAGGSAIPKEENLSEDSKSSSLNSGNYLNPACRNPMYIHTSVSQDFSRSVPGTTSSPLVGDISPKSSPHEVKFQMQRKSEGN*