ENST00000532889.1 SPATA19
Information
- Transcript ID
- ENST00000532889.1
- Genome
- hg38
- Position
- chr11:133,840,762-133,845,538
- Strand
- -
- CDS length
- 504
- Amino acid length
- 168
- Gene symbol
- SPATA19
- Gene type
- protein-coding
- Gene description
- spermatogenesis associated 19
- Gene Entrez Gene ID
- 219938
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 133,840,762 | 133,840,809 |
| 6 | 133,842,030 | 133,842,105 |
| 5 | 133,842,485 | 133,842,562 |
| 4 | 133,844,246 | 133,844,337 |
| 3 | 133,844,509 | 133,844,640 |
| 2 | 133,845,134 | 133,845,190 |
| 1 | 133,845,369 | 133,845,538 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 133,842,039 | 133,842,105 |
| 5 | CDS | 133,842,485 | 133,842,562 |
| 4 | CDS | 133,844,246 | 133,844,337 |
| 3 | CDS | 133,844,509 | 133,844,640 |
| 2 | CDS | 133,845,134 | 133,845,190 |
| 1 | CDS | 133,845,369 | 133,845,446 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 133,710,657 | 133,715,433 | Link |
CDS sequence
ATGATAATTACGACATGGATTGTGTATATTCTTGCTCGGAAAGGTGTAGGGCTTCCCTTCCTACCAATAACCAGTTCGGACATTGACGTTGTGGAAAGTGAGGCTGTGTCTGTACTACATCATTGGTTGAAAAAAACAGAAGAAGAGGCTTCTCGGGGCATAAAGGAAAAGCTGTCCATCAACCACCCTTCCCAGGGTGTAAGGGAGAAGATGTCCACTGACTCCCCTCCCACCCATGGCCAGGACATCCACGTGACCAGAGATGTGGTGAAGCACCACCTCTCTAAGTCTGATTTGTTGGCAAACCAGAGCCAAGAGGTCCTAGAGGAGAGAACACGAATCCAGTTCATAAGATGGAGCCACACTCGTATCTTCCAAGTGCCAAGTGAGATGACAGAGGACATCATGCGAGATCGAATAGAGCAGGTGAGACGAAGCATATCCCGTCTTACAGATGTCTCAGCTCAGGACTTCAGTATGAGACCCTCCTCCTCAGACTGCTGA
Amino sequence
MIITTWIVYILARKGVGLPFLPITSSDIDVVESEAVSVLHHWLKKTEEEASRGIKEKLSINHPSQGVREKMSTDSPPTHGQDIHVTRDVVKHHLSKSDLLANQSQEVLEERTRIQFIRWSHTRIFQVPSEMTEDIMRDRIEQVRRSISRLTDVSAQDFSMRPSSSDC*