ENST00000270560.4 TM4SF5
Information
- Transcript ID
- ENST00000270560.4
- Genome
- hg38
- Position
- chr17:4,771,886-4,783,211
- Strand
- +
- CDS length
- 594
- Amino acid length
- 198
- Gene symbol
- TM4SF5
- Gene type
- protein-coding
- Gene description
- transmembrane 4 L six family member 5
- Gene Entrez Gene ID
- 9032
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 4,771,886 | 4,772,099 |
| 2 | 4,780,789 | 4,780,869 |
| 3 | 4,782,503 | 4,782,639 |
| 4 | 4,782,854 | 4,783,037 |
| 5 | 4,783,114 | 4,783,211 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 4,771,923 | 4,772,099 |
| 2 | CDS | 4,780,789 | 4,780,869 |
| 3 | CDS | 4,782,503 | 4,782,639 |
| 4 | CDS | 4,782,854 | 4,783,037 |
| 5 | CDS | 4,783,114 | 4,783,128 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 4,675,181 | 4,686,506 | Link |
CDS sequence
ATGTGTACGGGAAAATGTGCCCGCTGTGTGGGGCTCTCCCTCATTACCCTCTGCCTCGTCTGCATTGTGGCCAACGCCCTCCTGCTGGTACCTAATGGGGAGACCTCCTGGACCAACACCAACCATCTCAGCTTGCAAGTCTGGCTCATGGGCGGCTTCATTGGCGGGGGCCTAATGGTACTGTGTCCGGGGATTGCAGCCGTTCGGGCAGGGGGCAAGGGCTGCTGTGGTGCTGGGTGCTGTGGAAACCGCTGCAGGATGCTGCGCTCGGTCTTCTCCTCGGCGTTCGGGGTGCTTGGTGCCATCTACTGCCTCTCGGTGTCTGGAGCTGGGCTCCGAAATGGACCCAGATGCTTAATGAACGGCGAGTGGGGCTACCACTTCGAAGACACCGCGGGAGCTTACTTGCTCAACCGCACTCTATGGGATCGGTGCGAGGCGCCCCCTCGCGTGGTCCCCTGGAATGTGACGCTCTTCTCGCTGCTGGTGGCCGCCTCCTGCCTGGAGATAGTACTGTGTGGGATCCAGCTGGTGAACGCGACCATTGGTGTCTTCTGCGGCGATTGCAGGAAAAAACAGGACACACCTCACTGA
Amino sequence
MCTGKCARCVGLSLITLCLVCIVANALLLVPNGETSWTNTNHLSLQVWLMGGFIGGGLMVLCPGIAAVRAGGKGCCGAGCCGNRCRMLRSVFSSAFGVLGAIYCLSVSGAGLRNGPRCLMNGEWGYHFEDTAGAYLLNRTLWDRCEAPPRVVPWNVTLFSLLVAASCLEIVLCGIQLVNATIGVFCGDCRKKQDTPH*