ENST00000322048.12 ROGDI
Information
- Transcript ID
- ENST00000322048.12
- Genome
- hg38
- Position
- chr16:4,796,968-4,802,633
- Strand
- -
- CDS length
- 864
- Amino acid length
- 288
- Gene symbol
- ROGDI
- Gene type
- protein-coding
- Gene description
- rogdi atypical leucine zipper
- Gene Entrez Gene ID
- 79641
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 11 | 4,796,968 | 4,797,501 |
| 10 | 4,797,714 | 4,797,840 |
| 9 | 4,797,938 | 4,797,987 |
| 8 | 4,798,071 | 4,798,184 |
| 7 | 4,798,569 | 4,798,667 |
| 6 | 4,799,686 | 4,799,781 |
| 5 | 4,800,498 | 4,800,578 |
| 4 | 4,801,267 | 4,801,321 |
| 3 | 4,801,503 | 4,801,585 |
| 2 | 4,802,382 | 4,802,453 |
| 1 | 4,802,527 | 4,802,633 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 11 | CDS | 4,797,460 | 4,797,501 |
| 10 | CDS | 4,797,714 | 4,797,840 |
| 9 | CDS | 4,797,938 | 4,797,987 |
| 8 | CDS | 4,798,071 | 4,798,184 |
| 7 | CDS | 4,798,569 | 4,798,667 |
| 6 | CDS | 4,799,686 | 4,799,781 |
| 5 | CDS | 4,800,498 | 4,800,578 |
| 4 | CDS | 4,801,267 | 4,801,321 |
| 3 | CDS | 4,801,503 | 4,801,585 |
| 2 | CDS | 4,802,382 | 4,802,453 |
| 1 | CDS | 4,802,527 | 4,802,571 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr16 | 4,846,969 | 4,852,634 | Link |
CDS sequence
ATGGCCACCGTGATGGCAGCGACGGCGGCGGAGCGGGCGGTGCTGGAGGAGGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGAGGCCTCTCTGCGCTTCACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGCACAGACCAGGTGAAGGGTGTGCTGACTCTGCAGGGGGATGCCCTCAGCCAGGCGGATGTGAACCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGAGGACAAGCAGTGGAAGCTGCAGCAGATCCAGGATGCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTTACCAGCCGGGACCAGAGCTACCAGTTCAAGACGGGCGCTGAGGTCCTCAAGCTGATGGACGCAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGCTCACCACCCCCGCCACCCTCACCCTCCCCGAGATCGCCGCCAGCGGCCTCACGCGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAACGTCTACATCAACCTCAACAAGCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGTTCGAGTGGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACAGACCCTTCTGA
Amino sequence
MATVMAATAAERAVLEEEFRWLLHDEVHAVLKQLQDILKEASLRFTLPGSGTEGPAKQENFILGSCGTDQVKGVLTLQGDALSQADVNLKMPRNNQLLHFAFREDKQWKLQQIQDARNHVSQAIYLLTSRDQSYQFKTGAEVLKLMDAVMLQLTRARNRLTTPATLTLPEIAASGLTRMFAPALPSDLLVNVYINLNKLCLTVYQLHALQPNSTKNFRPAGGAVLHSPGAMFEWGSQRLEVSHVHKVECVIPWLNDALVYFTVSLQLCQQLKDKISVFSSYWSYRPF*