ENST00000380107.5 TRIM6

Information
Transcript ID
ENST00000380107.5
Genome
hg38
Position
chr11:5,596,129-5,612,423
Strand
+
CDS length
1,389
Amino acid length
463
Gene symbol
TRIM6
Gene type
protein-coding
Gene description
tripartite motif containing 6
Gene Entrez Gene ID
117854
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 5,596,129 5,596,181
2 5,603,246 5,603,561
3 5,603,640 5,603,735
4 5,604,534 5,604,629
5 5,605,337 5,605,567
6 5,608,372 5,608,394
7 5,610,145 5,610,245
8 5,610,535 5,610,561
9 5,610,777 5,612,423
CDS
Exon number Type Start Stop
2 CDS 5,603,313 5,603,561
3 CDS 5,603,640 5,603,735
4 CDS 5,604,534 5,604,629
5 CDS 5,605,337 5,605,567
6 CDS 5,608,372 5,608,394
7 CDS 5,610,145 5,610,245
8 CDS 5,610,535 5,610,561
9 CDS 5,610,777 5,611,342
Other genome
Genome Chromosome Start End Links
hg19 chr11 5,617,359 5,633,653 Link
CDS sequence
ATGACTTCACCAGTACTGGTGGACATACGAGAAGAGGTGACCTGCCCTATCTGCCTGGAGCTCCTAACAGAACCCCTGAGCATAGACTGTGGCCACAGCTTCTGCCAAGCCTGCATCACACCAAATGGCAGGGAATCAGTGATTGGTCAAGAAGGGGAAAGAAGCTGCCCTGTGTGCCAGACCAGCTACCAGCCAGGGAACCTGCGGCCTAATCGGCATCTGGCCAACATAGTGAGGCGGCTCAGAGAGGAGGATGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCCTCGTGGAGGAGGTTGCCCAGGAGTACCAGGAGAAGTTTCAGGAGTCTCTAAAGAAGCTGAAGAACGAGGAGCAGGAAGCTGAGAAGCTAACAGCTTTTATCAGAGAGAAGAAAACATCCTGGAAGAATCAGATGGAGCCTGAGAGATGCAGGATCCAGACAGAGTTTAATCAGCTGCGAAATATCCTAGACAGAGTGGAGCAACGGGAGCTGAAAAAGCTGGAACAGGAAGAGAAGAAGGGGCTACGAATTATAGAAGAGGCTGAGAATGATCTGGTCCACCAGACCCAGTCGCTGCGAGAGCTCATCTCGGATCTGGAGCGTCGATGTCAGGGGTCAACAATGGAGCTGCTGCAGGATGTGAGTGATGTCACAGAAAGGAGTGAGTTCTGGACCCTGAGGAAGCCAGAAGCTCTCCCTACAAAGCTGAGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATGCTGCGAGTGTGTAGAGAGCTGACAGATGTCCAAAGCTACTGGGTTGACGTGACCCTGAATCCACACACAGCTAATTTAAATCTTGTCCTGGCTAAAAACCGGAGACAAGTGAGGTTTGTGGGAGCTAAAGTATCTGGACCTTCCTGTCTGGAAAAGCATTATGACTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGGTAAGCATTACTGGGAGGTAGATGTGGCCAAGAAGACTGCCTGGATCCTGGGGGTATGCAGCAATTCACTGGGACCTACATTCTCTTTCAACCATTTTGCTCAAAATCACAGTGCTTACTCCAGGTATCAGCCTCAGAGTGGATACTGGGTGATTGGGTTACAGCATAACCATGAATATAGGGCCTATGAGGATTCTTCCCCTTCCCTGCTTCTCTCCATGACAGTGCCCCCTCGCCGTGTTGGGGTTTTCTTAGATTATGAGGCTGGTACTGTCTCCTTTTATAATGTCACAAACCATGGCTTCCCCATCTACACTTTCTCTAAATATTACTTTCCCACTACTCTTTGTCCATATTTTAATCCTTGCAACTGTGTAATTCCTATGACCCTGCGTCGTCCAAGCTCTTGA
Amino sequence
MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS*