ENST00000375151.5 TSR2
Information
- Transcript ID
- ENST00000375151.5
- Genome
- hg38
- Position
- chrX:54,440,404-54,448,032
- Strand
- +
- CDS length
- 576
- Amino acid length
- 192
- Gene symbol
- TSR2
- Gene type
- protein-coding
- Gene description
- TSR2 ribosome maturation factor
- Gene Entrez Gene ID
- 90121
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 54,440,404 | 54,440,502 |
| 2 | 54,440,690 | 54,440,780 |
| 3 | 54,443,400 | 54,443,491 |
| 4 | 54,444,008 | 54,444,184 |
| 5 | 54,444,416 | 54,448,032 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 54,440,422 | 54,440,502 |
| 2 | CDS | 54,440,690 | 54,440,780 |
| 3 | CDS | 54,443,400 | 54,443,491 |
| 4 | CDS | 54,444,008 | 54,444,184 |
| 5 | CDS | 54,444,416 | 54,444,550 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 54,466,837 | 54,474,465 | Link |
CDS sequence
ATGGCGGGCGCTGCAGAAGATGCGCGAGCTCTTTTCCGGGCTGGGGTCTGCGCGGCCCTGGAGGCCTGGCCGGCCTTGCAGATCGCTGTGGAGAATGGCTTCGGGGGTGTGCACAGCCAGGAGAAGGCCAAGTGGCTGGGGGGTGCAGTGGAGGATTACTTCATGCGCAATGCTGACTTGGAGCTAGATGAGGTGGAAGACTTCCTTGGAGAGCTGTTGACCAACGAGTTTGATACAGTTGTGGAAGACGGGAGTCTGCCCCAGGTGAGCCAGCAACTGCAGACCATGTTCCACCACTTCCAGAGGGGTGATGGGGCTGCTCTGAGGGAGATGGCCTCCTGCATCACTCAGAGAAAATGCAAGGTCACAGCCACTGCACTTAAGACAGCTAGAGAGACTGATGAGGATGAAGATGATGTGGACAGTGTGGAAGAGATGGAGGTCACAGCTACGAATGATGGGGCTGCTACAGATGGGGTCTGCCCCCAGCCTGAACCCTCTGATCCAGACGCTCAGACTATTAAGGAAGAGGATATAGTGGAAGATGGCTGGACCATTGTCCGGAGAAAAAAATGA
Amino sequence
MAGAAEDARALFRAGVCAALEAWPALQIAVENGFGGVHSQEKAKWLGGAVEDYFMRNADLELDEVEDFLGELLTNEFDTVVEDGSLPQVSQQLQTMFHHFQRGDGAALREMASCITQRKCKVTATALKTARETDEDEDDVDSVEEMEVTATNDGAATDGVCPQPEPSDPDAQTIKEEDIVEDGWTIVRRKK*