ENST00000298396.7 SSX3
Information
- Transcript ID
- ENST00000298396.7
- Genome
- hg38
- Position
- chrX:48,346,427-48,356,703
- Strand
- -
- CDS length
- 567
- Amino acid length
- 189
- Gene symbol
- SSX3
- Gene type
- protein-coding
- Gene description
- SSX family member 3
- Gene Entrez Gene ID
- 10214
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 48,346,427 | 48,347,035 |
| 7 | 48,347,500 | 48,347,604 |
| 6 | 48,349,987 | 48,350,122 |
| 5 | 48,352,100 | 48,352,149 |
| 4 | 48,353,999 | 48,354,094 |
| 3 | 48,354,632 | 48,354,746 |
| 2 | 48,355,181 | 48,355,269 |
| 1 | 48,356,634 | 48,356,703 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 48,347,504 | 48,347,604 |
| 6 | CDS | 48,349,987 | 48,350,122 |
| 5 | CDS | 48,352,100 | 48,352,149 |
| 4 | CDS | 48,353,999 | 48,354,094 |
| 3 | CDS | 48,354,632 | 48,354,746 |
| 2 | CDS | 48,355,181 | 48,355,249 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 48,205,862 | 48,216,138 | Link |
CDS sequence
ATGAACGGAGATGACACCTTTGCAAGGAGACCCACGGTTGGTGCTCAAATACCAGAGAAGATACAAAAGGCCTTCGATGATATTGCCAAATACTTCTCTAAGGAAGAGTGGGAAAAGATGAAAGTCTCGGAGAAAATCGTCTATGTGTATATGAAGAGAAAGTATGAGGCCATGACTAAACTAGGTTTCAAGGCCATCCTCCCATCTTTCATGCGTAATAAACGGGTCACAGACTTCCAGGGGAATGATTTTGATAATGACCCTAACCGTGGGAATCAGGTTCAACGTCCTCAGATGACTTTCGGCAGGCTCCAGGGAATCTTCCCGAAGATCATGCCCAAGAAGCCAGCAGAGGAAGGAAATGTTTCGAAGGAAGTGCCAGAAGCATCTGGCCCACAAAACGATGGGAAACAGCTGTGCCCCCCGGGAAAACCAACTACCTCTGAGAAGATTAACATGATATCTGGACCCAAAAGGGGGGAACATGCCTGGACCCACAGACTGCGTGAGAGAAAGCAGCTGGTGATTTATGAAGAGATCAGCGATCCTGAGGAAGATGATGAGTAA
Amino sequence
MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTKLGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGPKRGEHAWTHRLRERKQLVIYEEISDPEEDDE*