ENST00000621465.5 COPZ2
Information
- Transcript ID
- ENST00000621465.5
- Genome
- hg38
- Position
- chr17:48,026,167-48,037,797
- Strand
- -
- CDS length
- 633
- Amino acid length
- 211
- Gene symbol
- COPZ2
- Gene type
- protein-coding
- Gene description
- COPI coat complex subunit zeta 2
- Gene Entrez Gene ID
- 51226
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 48,026,167 | 48,026,475 |
| 8 | 48,028,472 | 48,028,510 |
| 7 | 48,029,125 | 48,029,176 |
| 6 | 48,032,156 | 48,032,233 |
| 5 | 48,032,686 | 48,032,741 |
| 4 | 48,033,211 | 48,033,302 |
| 3 | 48,033,863 | 48,033,944 |
| 2 | 48,036,851 | 48,036,925 |
| 1 | 48,037,667 | 48,037,797 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 9 | CDS | 48,026,428 | 48,026,475 |
| 8 | CDS | 48,028,472 | 48,028,510 |
| 7 | CDS | 48,029,125 | 48,029,176 |
| 6 | CDS | 48,032,156 | 48,032,233 |
| 5 | CDS | 48,032,686 | 48,032,741 |
| 4 | CDS | 48,033,211 | 48,033,302 |
| 3 | CDS | 48,033,863 | 48,033,944 |
| 2 | CDS | 48,036,851 | 48,036,925 |
| 1 | CDS | 48,037,667 | 48,037,777 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 46,103,533 | 46,115,159 | Link |
CDS sequence
ATGCAGCGGCCCGAGGCCTGGCCACGTCCGCACCCGGGGGAGGGGGCCGCGGCGGCCCAGGCCGGGGGCCCGGCGCCGCCTGCTCGAGCCGGGGAGCCCTCGGGGCTGCGGTTGCAGGAACCTTCCCTCTACACCATCAAGGCTGTTTTCATCCTAGATAATGACGGGCGCCGGCTGCTGGCCAAGTATTATGATGACACATTCCCCTCCATGAAGGAGCAGATGGTTTTCGAGAAAAATGTCTTCAACAAGACCAGCCGGACTGAGAGTGAGATTGCATTTTTTGGGGGTATGACCATCGTCTACAAGAACAGCATTGACCTCTTCCTATACGTGGTGGGCTCATCCTACGAGAATGAGCTGATGCTCATGTCTGTTCTCACCTGCCTGTTTGAGTCTCTGAACCACATGTTAAGGAAGAACGTGGAGAAGCGCTGGTTGCTGGAGAACATGGACGGAGCCTTCTTGGTGCTGGACGAGATTGTGGATGGCGGTGTGATTCTGGAGAGTGACCCCCAGCAAGTGATCCAGAAGGTGAATTTTAGGGCAGATGATGGCGGCTTGACTGAACAGAGTGTGGCCCAGGTTCTTCAGTCTGCCAAGGAACAAATTAAATGGTCGTTATTGAAATGA
Amino sequence
MQRPEAWPRPHPGEGAAAAQAGGPAPPARAGEPSGLRLQEPSLYTIKAVFILDNDGRRLLAKYYDDTFPSMKEQMVFEKNVFNKTSRTESEIAFFGGMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFLVLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK*