ENST00000533353.5 ARHGAP20
Information
- Transcript ID
- ENST00000533353.5
- Genome
- hg38
- Position
- chr11:110,577,054-110,713,189
- Strand
- -
- CDS length
- 3,498
- Amino acid length
- 1,166
- Gene symbol
- ARHGAP20
- Gene type
- protein-coding
- Gene description
- Rho GTPase activating protein 20
- Gene Entrez Gene ID
- 57569
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 16 | 110,577,054 | 110,581,225 |
| 15 | 110,582,321 | 110,582,435 |
| 14 | 110,583,548 | 110,583,737 |
| 13 | 110,586,216 | 110,586,325 |
| 12 | 110,590,648 | 110,590,809 |
| 11 | 110,591,977 | 110,592,155 |
| 10 | 110,606,561 | 110,606,749 |
| 9 | 110,608,984 | 110,609,050 |
| 8 | 110,611,309 | 110,611,386 |
| 7 | 110,614,561 | 110,614,645 |
| 6 | 110,615,553 | 110,615,594 |
| 5 | 110,624,162 | 110,624,311 |
| 4 | 110,630,628 | 110,630,792 |
| 3 | 110,690,547 | 110,690,629 |
| 2 | 110,690,972 | 110,691,039 |
| 1 | 110,712,979 | 110,713,189 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 16 | CDS | 110,579,370 | 110,581,225 |
| 15 | CDS | 110,582,321 | 110,582,435 |
| 14 | CDS | 110,583,548 | 110,583,737 |
| 13 | CDS | 110,586,216 | 110,586,325 |
| 12 | CDS | 110,590,648 | 110,590,809 |
| 11 | CDS | 110,591,977 | 110,592,155 |
| 10 | CDS | 110,606,561 | 110,606,749 |
| 9 | CDS | 110,608,984 | 110,609,050 |
| 8 | CDS | 110,611,309 | 110,611,386 |
| 7 | CDS | 110,614,561 | 110,614,645 |
| 6 | CDS | 110,615,553 | 110,615,594 |
| 5 | CDS | 110,624,162 | 110,624,311 |
| 4 | CDS | 110,630,628 | 110,630,792 |
| 3 | CDS | 110,690,547 | 110,690,629 |
| 2 | CDS | 110,690,972 | 110,690,998 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 110,447,778 | 110,583,912 | Link |
CDS sequence
ATGACATTTTGGATTATAATAAATAAGAAAATGAAAACACTAGCAGAAAGGAGGAGGAGCGCTCCATCTCTTATCCTGGATAAAGCCCTACAAAAACGGCCTACTACCAGGGACAGTCCTTCTGCTAGTGTTGACACATGCACATTTCTGTCATCATTAGTGTGCTCCAATAGGACTCTGCTGATTGATGGCCGGGCAGAACTCAAAAGAGGCCTCCAGAGGCAGGAGCGGCATCTTTTCCTATTCAATGATCTGTTTGTTGTGGCCAAAATCAAATATAACAATAACTTTAAGATAAAAAATAAAATTAAATTAACTGATATGTGGACAGCAAGCTGTGTGGATGAAGTGGGAGAAGGCAACACCAATGCCATGAAATCCTTTGTTTTGGGCTGGCCCACAGTGAACTTTGTGGCCACTTTCAGTTCTCCAGAACAAAAGGACAAATGGCTCTCTCTCCTTCAGAGATACATCAATCTAGAGAAAGAAAAGGACTACCCGAAGAGCATTCCCCTCAAAATCTTCGCCAAGGACATTGGGAATTGTGCCTACTCTAAAACTATAACAGTAATGAATTCAGATACAGCGAATGAAGTTATCAACATGTCATTACCAATGCTAGGGATAACTGGCTCTGAGAGAGATTACCAGTTGTGGGTCAATTCTGGCAAAGAAGAGGCTCCATACCCACTCATTGGGCATGAATATCCATATGGAATTAAAATGAGCCATCTTCGAGACTCTGCACTCCTGACACCGGGATCAAAGGACTCTACCACCCCTTTCAACCTCCAGGAGCCCTTCCTTATGGAACAGCTCCCCCGAGAGATGCAGTGCCAGTTCATCCTGAAGCCCAGCCGCCTGGCTGCAGCCCAGCAACTGAGTGATTCAGGTCATAAGACATTTAAAAGGAGAAGATCTATCATAAACTGGGCCTTCTGGCGAGGTTCTAGCACTCACCTGGACAACTTGCCCTCATCGCCAACATCACCTATGCCAGGACAGCTCTTTGGAATTTCTCTGCCAAATATTTGTGAGAATGACAATCTGCCCAAACCTGTCTTGGATATGCTTTTCTTTCTTAATCAAAAAGGACCTCTCACCAAAGGTATCTTCAGGCAATCAGCCAATGTGAAATCCTGCAGAGAACTAAAAGAGAAATTGAATTCTGGAGTCGAAGTACACCTAGACTGTGAATCTATTTTTGTGATAGCATCTGTCTTAAAGGATTTTCTGCGAAATATTCCAGGAAGTATTTTTTCATCAGATCTCTATGATCACTGGGTCTCTGTAATGGATCAAGGAAATGATGAAGAGAAAATAAATACTGTTCAAAGGCTATTAGACCAGCTTCCGAGAGCCAATGTTGTTCTCCTAAGGTATCTTTTTGGGGTGTTACACAACATTGAGCAACATTCCTCATCCAATCAGATGACTGCATTTAATTTAGCTGTGTGTGTCGCTCCAAGTATTCTTTGGCCTCCTGCTTCCTCCAGCCCAGAACTAGAAAACGAATTTACAAAAAAGGTTTCCCTGCTTATACAATTTCTGATTGAGAATTGCCTTAGGATATTTGGAGAAGAAATCACTTCCCTCTTCAGAGAGGTTTCAGTGAGATGTGACACTAGAGAGAATGCCTCAGATATTTCTTGCTTTCAACTGAATGACTCCTCCTATGACAGCTTGGAAAATGAGCTAAATGAGGATGTTGATGCACCATGCAGTGACTTGGTAAAGAAACTTGGCCAGGGGAGCAGAAGCATGGACTCTGTCTTAACCCTCAGTGACTATGATCTTGACCAGCCCGAGGTGGAAGGCCTTTTAACCCTAAGCGACTTTGACTTGGCCCATTCTAAAGATGAAGATGTTCAAATGAAACGGCCTCTTGAATCCAAGCCGGTGAACATTTTAGTGTACACAAAGATCCCACTGCGGGATCATGCCAGGGCCCCATCTGCCATGTGCACACCCAGCTACCTGTCCACAGCTGCAGCAAATGCTGCAAAAAGCCTGAGGCGACACCGGCGTTGCTCAGAGCCCAGCATCGACTATCTGGATTCAAAGCTTTCCTACCTCAGGGAGTTTTATCAGAAAAAGCTACGCAAGTCCAGCTGTGATGCAATTCTTTCTCAAAAAGATGAAGACTATCTGAAGCAGAATCAACCCCTCCAGGAGGAAGGAAAGACATGTTTTAAACAGAGTTTAGTCACAGGCACTGATGTCAGCAAGAAAAATGCCACTACTCAAAACACTAAGAAGAAAAGCTTGTCTGGTAGTGAAGGAAATCACGTGAAACTTTTCCCTAAGTCTAAGCCAGTGGCCATTTCTGTGGCATCTTATAGTCCTATGTCCTCACAGGATCATTCCAAGAACCAGCCCTTTGATGTGAATACATCTGGATACTCCCCACCACACACAGCAGATGCCCTCAAGGGTCCAAGGACACATCGGCGCTGCTCAGAGCCCAACATAGAAGACCAGAACCGCAAGCTGACCTATCTCAGGGGAATTTATTCAAAGAAACAACATAAAACCAGCTGTGAAGCTGGTCTCTTGCATGGAGAGGAGGATTATCTCAAACGGCATAAGTCTTTGCAAATGGAGGGGCAGAAGCTCATTAATCAGAGTTTAGTCATGGGGATTGAGGTGGGCAAGAGTAGTGCCACAAACCAAAACACTGAGAAGGTTTTACCCCCAAGATTAAACCTTTGCCCAAGGACCAGCTATTCCAGCTTATCCTCCCCAGGCACTTCCCCATCCGGCTCATCAGTAAGCTCCCAAGACAGTGCTTTTTCTCAGATTTCTGAACACTCTGTGTTTACACCCACTGAGACTTCCTCTCCAATAGATTGCACTTTTCAGGCTCAGAGAAAACGGGAAGACCTTTCTCCTGACTTTAGCAATGCCAGCCATGTTTCCGGAATGCCCGGTCCCTCATCAGGGCAGGCTTGCAGCCGCCCAGCCTATACAAAGAAGGACACCATGGAGTGGCATTCACAAATGCATTCTGTAACTCTTCATCCCAGCACATGGTTGAGAAATGGTGTGGCCAGTTTGAAAAACTGGTCCCTCAAAAAGAAAGCAAAGGCAGCCAGACCAGAGGAAGAGAAAATAGCTTCTCCAAAAGGACCCTTAGAGCCACCCCCACATGCTTCTGGTGTTCCAGAAGCCAACTCACTGCAAGAGGAACAAAAAGACTTGCCCTTAAGGGCAGCTGAAGGACTGTCCCCTGTGCAGTCAGCCCAAAGGTGTAGTTCTTCTCCCTTCCAGGACTCAGAGAGACACTGTAGCTCTCCATTCAGCCTGGTGGAGAGCAGACTTAAGCTGTGCATGAAGTCACATGAGGAAATAGAGCCTGGTAGTCAGAGCTCTTCTGGTTCTCTGCCTTGGGAAAGAGCCTCAGCCAGCTCTTGGACTCTAGAGGATGCGACCAGCCCAGACTCAGGGCCTACAGTGGTCTGCGACATTGAGGACAGGTATTTAACCAAAGACATTTAA
Amino sequence
MTFWIIINKKMKTLAERRRSAPSLILDKALQKRPTTRDSPSASVDTCTFLSSLVCSNRTLLIDGRAELKRGLQRQERHLFLFNDLFVVAKIKYNNNFKIKNKIKLTDMWTASCVDEVGEGNTNAMKSFVLGWPTVNFVATFSSPEQKDKWLSLLQRYINLEKEKDYPKSIPLKIFAKDIGNCAYSKTITVMNSDTANEVINMSLPMLGITGSERDYQLWVNSGKEEAPYPLIGHEYPYGIKMSHLRDSALLTPGSKDSTTPFNLQEPFLMEQLPREMQCQFILKPSRLAAAQQLSDSGHKTFKRRRSIINWAFWRGSSTHLDNLPSSPTSPMPGQLFGISLPNICENDNLPKPVLDMLFFLNQKGPLTKGIFRQSANVKSCRELKEKLNSGVEVHLDCESIFVIASVLKDFLRNIPGSIFSSDLYDHWVSVMDQGNDEEKINTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSSNQMTAFNLAVCVAPSILWPPASSSPELENEFTKKVSLLIQFLIENCLRIFGEEITSLFREVSVRCDTRENASDISCFQLNDSSYDSLENELNEDVDAPCSDLVKKLGQGSRSMDSVLTLSDYDLDQPEVEGLLTLSDFDLAHSKDEDVQMKRPLESKPVNILVYTKIPLRDHARAPSAMCTPSYLSTAAANAAKSLRRHRRCSEPSIDYLDSKLSYLREFYQKKLRKSSCDAILSQKDEDYLKQNQPLQEEGKTCFKQSLVTGTDVSKKNATTQNTKKKSLSGSEGNHVKLFPKSKPVAISVASYSPMSSQDHSKNQPFDVNTSGYSPPHTADALKGPRTHRRCSEPNIEDQNRKLTYLRGIYSKKQHKTSCEAGLLHGEEDYLKRHKSLQMEGQKLINQSLVMGIEVGKSSATNQNTEKVLPPRLNLCPRTSYSSLSSPGTSPSGSSVSSQDSAFSQISEHSVFTPTETSSPIDCTFQAQRKREDLSPDFSNASHVSGMPGPSSGQACSRPAYTKKDTMEWHSQMHSVTLHPSTWLRNGVASLKNWSLKKKAKAARPEEEKIASPKGPLEPPPHASGVPEANSLQEEQKDLPLRAAEGLSPVQSAQRCSSSPFQDSERHCSSPFSLVESRLKLCMKSHEEIEPGSQSSSGSLPWERASASSWTLEDATSPDSGPTVVCDIEDRYLTKDI*