ENST00000392245.5 SUMO1
Information
- Transcript ID
- ENST00000392245.5
- Genome
- hg38
- Position
- chr2:202,206,187-202,238,599
- Strand
- -
- CDS length
- 306
- Amino acid length
- 102
- Gene symbol
- SUMO1
- Gene type
- protein-coding
- Gene description
- small ubiquitin like modifier 1
- Gene Entrez Gene ID
- 7341
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 202,206,187 | 202,206,803 |
| 5 | 202,207,253 | 202,207,321 |
| 4 | 202,210,735 | 202,210,806 |
| 3 | 202,214,357 | 202,214,434 |
| 2 | 202,220,032 | 202,220,106 |
| 1 | 202,238,440 | 202,238,599 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 202,207,253 | 202,207,321 |
| 4 | CDS | 202,210,735 | 202,210,806 |
| 3 | CDS | 202,214,357 | 202,214,434 |
| 2 | CDS | 202,220,032 | 202,220,106 |
| 1 | CDS | 202,238,440 | 202,238,451 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 203,070,910 | 203,103,322 | Link |
CDS sequence
ATGTCTGACCAGGAGGCAAAACCTTCAACTGAGGACTTGGGGGATAAGAAGGAAGGTGAATATATTAAACTCAAAGTCATTGGACAGGATAGCAGTGAGATTCACTTCAAAGTGAAAATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAAGACAGGGTGTTCCAATGAATTCACTCAGGTTTCTCTTTGAGGGTCAGAGAATTGCTGATAATCATACTCCAAAAGAACTGGGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACGGGGGGTCATTCAACAGTTTAG
Amino sequence
MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV*