ENST00000595564.5 PAF1

Information
Transcript ID
ENST00000595564.5
Genome
hg38
Position
chr19:39,385,853-39,391,154
Strand
-
CDS length
1,458
Amino acid length
486
Gene symbol
PAF1
Gene type
protein-coding
Gene description
PAF1 homolog, Paf1/RNA polymerase II complex component
Gene Entrez Gene ID
54623
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
13 39,385,853 39,386,219
12 39,386,482 39,386,572
11 39,386,694 39,386,799
10 39,388,339 39,388,467
9 39,388,560 39,388,676
8 39,388,762 39,388,865
7 39,388,947 39,389,015
6 39,389,093 39,389,198
5 39,389,282 39,389,383
4 39,389,480 39,389,546
3 39,389,640 39,389,761
2 39,390,069 39,390,161
1 39,390,818 39,391,154
CDS
Exon number Type Start Stop
13 CDS 39,385,915 39,386,219
12 CDS 39,386,482 39,386,572
11 CDS 39,386,694 39,386,799
10 CDS 39,388,339 39,388,467
9 CDS 39,388,560 39,388,676
8 CDS 39,388,762 39,388,865
7 CDS 39,388,947 39,389,015
6 CDS 39,389,093 39,389,198
5 CDS 39,389,282 39,389,383
4 CDS 39,389,480 39,389,546
3 CDS 39,389,640 39,389,761
2 CDS 39,390,069 39,390,161
1 CDS 39,390,818 39,390,864
Other genome
Genome Chromosome Start End Links
hg19 chr19 39,876,493 39,881,794 Link
CDS sequence
ATGGCGCCCACCATCCAGACCCAGGCCCAGCGGGAGGATGGCCACAGGTCTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCTCCCTGATATCCCCTTCGACCCCAAGTTCATCACCTACCCCTTCGACCAGAACAGGTTCGTCCAGTACAAAGCCACTTCCTTGGAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGACCTGGGGGTCACCATCGATCTCATCAATCCTGACACCTACCGCATCGACCCCAATGTTCTTCTAGATCCAGCTGATGAGAAACTTTTGGAAGAGGAGATTCAGGCCCCCACCAGCTCCAAGAGATCCCAGCAGCACGCGAAGGTGGTGCCATGGATGCGAAAGACAGAGTACATCTCCACTGAGTTCAACCGTTATGGCATCTCCAATGAGAAGCCTGAGGTCAAGATTGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGAAGAAATATACAAAGACAGGGATAGCCAGATCACAGCCATTGAGAAGACTTTTGAGGATGCCCAGAAATCAATCTCACAGCATTACAGCAAACCCCGAGTCACACCGGTGGAGGTCATGCCTGTCTTCCCAGACTTTAAGATGTGGATCAATCCATGTGCTCAGGTGATCTTTGACTCAGACCCAGCCCCCAAGGACACGAGTGGTGCAGCTGCGTTGGAGATGATGTCTCAGGCCATGATTAGGGGCATGATGGATGAGGAAGGGAACCAGTTTGTGGCCTATTTCCTGCCTGTAGAAGAGACGTTGAAGAAACGAAAGCGGGACCAGGAGGAGGAGATGGACTATGCACCAGATGATGTGTATGACTACAAAATTGCTCGGGAGTACAACTGGAACGTGAAGAACAAAGCTAGCAAGGGCTATGAGGAAAACTACTTCTTCATCTTCCGAGAGGGTGACGGGGTTTACTACAATGAGTTGGAAACCAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAGAGGAGATGGAGACAGAAGAGAAAGAAGCTGGGGGCTCAGTGATGCTGATTCTGAGGACGATGCCGACTCTGATGATGAGGACAGAGGACAGGCCCAAGGTGGCAGTGACAATGATTCAGACAGCGGCAGCAATGGGGGTGGCCAGCGGAGCCGGAGCCACAGCCGCAGCGCCAGTCCCTTCCCCAGTGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGAAGCTGCAGCTTCTGATTCCAGTGAAGCTGATAGTGACAGTGACTGAGTCCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGCACTTTTCTAGTGGTCTGTTTGTGA
Amino sequence
MAPTIQTQAQREDGHRSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNVLLDPADEKLLEEEIQAPTSSKRSQQHAKVVPWMRKTEYISTEFNRYGISNEKPEVKIGVSVKQQFTEEEIYKDRDSQITAIEKTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEMMSQAMIRGMMDEEGNQFVAYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVKNKASKGYEENYFFIFREGDGVYYNELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKELEAQEARKAQLENHEPEEEEEEEMETEEKEAGGSVMLILRTMPTLMMRTEDRPKVAVTMIQTAAAMGVASGAGATAAAPVPSPVAASTRPRRMAVKLQLLIPVKLIVTVTESQGIQGWFRHHYCEQQSTFLVVCL*