ENST00000352068.5 SNX15
Information
- Transcript ID
- ENST00000352068.5
- Genome
- hg38
- Position
- chr11:65,027,538-65,039,792
- Strand
- +
- CDS length
- 771
- Amino acid length
- 257
- Gene symbol
- SNX15
- Gene type
- protein-coding
- Gene description
- sorting nexin 15
- Gene Entrez Gene ID
- 29907
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 65,027,538 | 65,027,636 |
2 | 65,032,168 | 65,032,203 |
3 | 65,032,431 | 65,032,551 |
4 | 65,034,847 | 65,034,962 |
5 | 65,035,059 | 65,035,206 |
6 | 65,035,520 | 65,035,663 |
7 | 65,039,686 | 65,039,792 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
1 | CDS | 65,027,538 | 65,027,636 |
2 | CDS | 65,032,168 | 65,032,203 |
3 | CDS | 65,032,431 | 65,032,551 |
4 | CDS | 65,034,847 | 65,034,962 |
5 | CDS | 65,035,059 | 65,035,206 |
6 | CDS | 65,035,520 | 65,035,663 |
7 | CDS | 65,039,686 | 65,039,792 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr11 | 64,795,010 | 64,807,264 | Link |
CDS sequence
ATGTCCCGCCAGGCGAAGGATGACTTCCTGCGGCACTACACAGTGTCGGACCCCAGGACTCACCCCAAGGGCTACACCGAGTACAAAGTAACCGCGCAGTTCATCTCAAAGAAGGACCCAGAGGATGTCAAAGAGGTGGTGGTCTGGAAGCGGTACAGCGACTTCCGCAAGCTGCATGGAGACCTGGCCTACACCCACCGCAACCTCTTCCGCCGCCTCGAGGAGTTCCCTGCTTTCCCCCGGGCCCAGGTGTTTGGCCGGTTTGAAGCCTCAGTGATCGAGGAGCGGCGAAAGGGGGCAGAGGACCTGCTTCGCTTCACTGTGCACATACCTGCGCTCAACAACAGCCCCCAGCTCAAGGAGTTCTTCCGGGGTGGGGAGGTGACCCGACCCTTGGAGGTGTCCAGGGACCTACACATCCTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCCGGCTATCCCAACTGCTCCCTGCAGAAAGGAGGGGCCTCGAGGAATTGGAGGTGCCAGTGGACCCCCCACCATCCAGCCCTGCCCAGGAGGCCCTGGATCTCCTCTTTAACTGTGAGAGCACCGAGGAGGCATCTGGTTCCCCTGCCCGAGGCCCCCTCACCGAGGCTGAGCTTGCCCTCTTCGACCCCTTCTCCAAGGAAGGTGACCCGTTGCCTGCCCGCCAGGAAGGTGTGAAGAAGAAGGCAGCTGAGTACCTGAAGCGGGCAGAGGAGATCCTGCGCCTGCACCTGTCTCAACTCCCACCCTAA
Amino sequence
MSRQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSSPAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEGDPLPARQEGVKKKAAEYLKRAEEILRLHLSQLPP*