ENST00000497685.5 UPK1B
Information
- Transcript ID
- ENST00000497685.5
- Genome
- hg38
- Position
- chr3:119,173,517-119,204,112
- Strand
- +
- CDS length
- 543
- Amino acid length
- 181
- Gene symbol
- UPK1B
- Gene type
- protein-coding
- Gene description
- uroplakin 1B
- Gene Entrez Gene ID
- 7348
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 119,173,517 | 119,173,638 |
| 2 | 119,187,775 | 119,187,975 |
| 3 | 119,190,245 | 119,190,319 |
| 4 | 119,190,982 | 119,191,104 |
| 5 | 119,194,219 | 119,194,398 |
| 6 | 119,199,057 | 119,199,140 |
| 7 | 119,203,917 | 119,204,112 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 119,187,946 | 119,187,975 |
| 3 | CDS | 119,190,245 | 119,190,319 |
| 4 | CDS | 119,190,982 | 119,191,104 |
| 5 | CDS | 119,194,219 | 119,194,398 |
| 6 | CDS | 119,199,057 | 119,199,140 |
| 7 | CDS | 119,203,917 | 119,203,967 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr3 | 118,892,364 | 118,922,959 | Link |
CDS sequence
ATGAAGTCCAGCAGGAAAATTCTTCTGGCGTATTTCATTCTGATGTTTATAGTATATGCCTTTGAAGTGGCATCTTGTATCACAGCAGCAACACAACAAGACTTTTTCACACCCAACCTCTTCCTGAAGCAGATGCTAGAGAGGTACCAAAACAACAGCCCTCCAAACAATGATGACCAGTGGAAAAACAATGGAGTCACCAAAACCTGGGACAGGCTCATGCTCCAGGACAATTGCTGTGGCGTAAATGGTCCATCAGACTGGCAAAAATACACATCTGCCTTCCGGACTGAGAATAATGATGCTGACTATCCCTGGCCTCGTCAATGCTGTGTTATGAACAATCTTAAAGAACCTCTCAACCTGGAGGCTTGTAAACTAGGCGTGCCTGGTTTTTATCACAATCAGGGCTGCTATGAACTGATCTCTGGTCCAATGAACCGACACGCCTGGGGGGTTGCCTGGTTTGGATTTGCCATTCTCTGCTGGACTTTTTGGGTTCTCCTGGGTACCATGTTCTACTGGAGCAGAATTGAATATTAA
Amino sequence
MKSSRKILLAYFILMFIVYAFEVASCITAATQQDFFTPNLFLKQMLERYQNNSPPNNDDQWKNNGVTKTWDRLMLQDNCCGVNGPSDWQKYTSAFRTENNDADYPWPRQCCVMNNLKEPLNLEACKLGVPGFYHNQGCYELISGPMNRHAWGVAWFGFAILCWTFWVLLGTMFYWSRIEY*