ENST00000266980.8 SLC39A5

Information
Transcript ID
ENST00000266980.8
Genome
hg38
Position
chr12:56,230,652-56,237,846
Strand
+
CDS length
1,623
Amino acid length
541
Gene symbol
SLC39A5
Gene type
protein-coding
Gene description
solute carrier family 39 member 5
Gene Entrez Gene ID
283375
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 56,230,652 56,230,873
2 56,231,204 56,231,561
3 56,232,689 56,232,872
4 56,234,824 56,234,986
5 56,235,157 56,235,326
6 56,235,560 56,235,700
7 56,236,396 56,236,492
8 56,236,582 56,236,746
9 56,236,931 56,237,011
10 56,237,150 56,237,340
11 56,237,588 56,237,846
CDS
Exon number Type Start Stop
2 CDS 56,231,275 56,231,561
3 CDS 56,232,689 56,232,872
4 CDS 56,234,824 56,234,986
5 CDS 56,235,157 56,235,326
6 CDS 56,235,560 56,235,700
7 CDS 56,236,396 56,236,492
8 CDS 56,236,582 56,236,746
9 CDS 56,236,931 56,237,011
10 CDS 56,237,150 56,237,340
11 CDS 56,237,588 56,237,731
Other genome
Genome Chromosome Start End Links
hg19 chr12 56,624,436 56,631,630 Link
CDS sequence
ATGATGGGGTCCCCAGTGAGTCATCTGCTGGCCGGCTTCTGTGTGTGGGTCGTCTTGGGCTGGGTAGGGGGCTCAGTCCCCAACCTGGGCCCTGCTGAGCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTGTACGGCGAGAATGGGACGCTGACTGCAGGGGGCTTGGCGCGGCTTCTCCACAGCCTGGGGCTAGGCCGAGTTCAGGGGCTTCGCCTGGGACAGCATGGGCCTCTGACTGGACGGGCTGCATCCCCAGCTGCAGACAATTCCACACACAGGCCACAGAACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGATGCCTCTGGGTCCCTCAGGGTGGGGTGACCTGGAAGAGTCAAAGGCCCCTCACCTACCCCGTGGGCCAGCCCCCTCGGGCCTGGACCTCCTTCACAGGCTTCTGTTGCTGGACCACTCATTGGCTGACCACCTGAATGAGGATTGTCTGAACGGCTCCCAGCTGCTGGTCAATTTTGGCTTGAGCCCCGCTGCTCCTCTGACCCCTCGTCAGTTTGCTCTGCTGTGCCCAGCCCTGCTTTATCAGATCGACAGCCGCGTCTGCATCGGCGCTCCGGCCCCTGCACCCCCAGGGGATCTACTATCTGCCCTGCTTCAGAGTGCCCTGGCAGTCCTGTTGCTCAGCCTCCCTTCTCCCCTATCCCTGCTGCTGCTGCGGCTCCTGGGACCTCGTCTACTACGGCCCTTGCTGGGCTTCCTGGGGGCCCTGGCGGTGGGCACTCTTTGTGGGGATGCACTGCTACATCTGCTACCGCATGCACAAGAAGGGCGGCACGCAGGACCTGGCGGACTACCAGAGAAGGACCTGGGCCCGGGGCTGTCAGTGCTCGGAGGCCTCTTCCTGCTCTTTGTGCTGGAGAACATGCTGGGGCTTTTGCGGCACCGAGGGCTCAGGCCAAGATGCTGCAGGCGAAAACGAAGGAATCTCGAAACACGCAACTTGGATCCGGAGAATGGCAGTGGGATGGCCCTTCAGCCCCTACAGGCAGCTCCAGAGCCAGGGGCTCAGGGCCAGAGGGAGAAGAACAGCCAGCACCCACCAGCTCTGGCCCCTCCTGGGCACCAAGGCCACAGTCATGGGCACCAGGGTGGCACTGATATCACGTGGATGGTCCTCCTGGGAGATGGTCTACACAACCTCACTGATGGGCTGGCCATAGGTGCTGCCTTCTCTGATGGCTTCTCCAGCGGCCTCAGTACCACCTTAGCGGTCTTCTGCCATGAGCTGCCCCACGAACTGGGTGACTTTGCCATGCTGCTCCAGTCAGGGCTGTCCTTTCGGCGGCTGCTGCTGCTGAGCCTCGTGTCTGGAGCCCTGGGATTGGGGGGTGCAGTCCTGGGGGTGGGGCTCAGCCTGGGCCCTGTCCCCCTCACTCCCTGGGTGTTTGGGGTCACTGCTGGGGTCTTCCTCTATGTGGCCCTTGTGGACATGCTACCAGCCCTGCTTCGTCCTCCGGAGCCCCTGCCTACGCCCCATGTGCTCCTGCAGGGGCTGGGGCTGCTGCTGGGGGGCGGCCTCATGCTTGCCATAACCCTGCTGGAGGAGCGGCTACTGCCCGTGACCACTGAGGGCTGA
Amino sequence
MMGSPVSHLLAGFCVWVVLGWVGGSVPNLGPAEQEQNHYLAQLFGLYGENGTLTAGGLARLLHSLGLGRVQGLRLGQHGPLTGRAASPAADNSTHRPQNPELSVDVWAGMPLGPSGWGDLEESKAPHLPRGPAPSGLDLLHRLLLLDHSLADHLNEDCLNGSQLLVNFGLSPAAPLTPRQFALLCPALLYQIDSRVCIGAPAPAPPGDLLSALLQSALAVLLLSLPSPLSLLLLRLLGPRLLRPLLGFLGALAVGTLCGDALLHLLPHAQEGRHAGPGGLPEKDLGPGLSVLGGLFLLFVLENMLGLLRHRGLRPRCCRRKRRNLETRNLDPENGSGMALQPLQAAPEPGAQGQREKNSQHPPALAPPGHQGHSHGHQGGTDITWMVLLGDGLHNLTDGLAIGAAFSDGFSSGLSTTLAVFCHELPHELGDFAMLLQSGLSFRRLLLLSLVSGALGLGGAVLGVGLSLGPVPLTPWVFGVTAGVFLYVALVDMLPALLRPPEPLPTPHVLLQGLGLLLGGGLMLAITLLEERLLPVTTEG*