ENST00000424459.7 GPBP1

Information
Transcript ID
ENST00000424459.7
Genome
hg38
Position
chr5:57,173,948-57,264,679
Strand
+
CDS length
1,482
Amino acid length
494
Gene symbol
GPBP1
Gene type
protein-coding
Gene description
GC-rich promoter binding protein 1
Gene Entrez Gene ID
65056
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 57,173,948 57,174,211
2 57,175,448 57,176,400
3 57,214,074 57,214,193
4 57,230,846 57,230,969
5 57,231,098 57,231,321
6 57,235,966 57,236,032
7 57,237,113 57,237,172
8 57,246,300 57,246,484
9 57,247,075 57,247,215
10 57,249,409 57,249,576
11 57,250,954 57,251,141
12 57,261,180 57,261,282
13 57,262,594 57,264,679
CDS
Exon number Type Start Stop
3 CDS 57,214,131 57,214,193
4 CDS 57,230,846 57,230,969
5 CDS 57,231,098 57,231,321
6 CDS 57,235,966 57,236,032
7 CDS 57,237,113 57,237,172
8 CDS 57,246,300 57,246,484
9 CDS 57,247,075 57,247,215
10 CDS 57,249,409 57,249,576
11 CDS 57,250,954 57,251,141
12 CDS 57,261,180 57,261,282
13 CDS 57,262,594 57,262,752
Other genome
Genome Chromosome Start End Links
hg19 chr5 56,469,775 56,560,506 Link
CDS sequence
ATGGCGCAGCATGACTTTGCTCCAGCCTGGCTTAATTTCCCTACTCCACCATCATCAACAAAGTCGTCATTGAATTTTGAGAAGCATTCTGAAAACTTTGCATGGACAGAGAATCGTTATGATGTGAACCGTCGACGACACAACTCTTCAGATGGCTTTGATTCTGCTATTGGGCGTCCTAATGGAGGTAACTTTGGAAGGAAAGAAAAAAATGGATGGCGTACACATGGAAGAAATGGTACAGAAAACATAAATCATCGAGGTGGATACCATGGTGGAAGTTCCCGTTCTCGTAGCAGTATTTTCCATGCAGGAAAAAGCCAAGGACTACATGAAAACAACATACCTGACAATGAAACCGGGAGGAAAGAAGACAAGAGAGAACGCAAACAGTTTGAAGCTGAGGATTTTCCGTCTTTAAATCCTGAGTATGAGAGAGAACCAAATCACAATAAGTCTTTAGCTGCAGGTGTGTGGGGCCTACACGCCCAGACACACACATACCCAACCAAAAAAATCTCCCAAGCTCCTCTCTTAGAATATCCTCCGAATCCTAAATCTAGAGCTCCAAGGATGCTGGTCATTAAGAAAGGTAATACAAAAGACTTACAGCTATCTGGATTCCCAGTAGTAGGAAATCTTCCGTCACAGCCAGTTAAGAATGGAACTGGTCCAAGTGTTTATAAAGGTTTAGTCCCTAAACCTGCTGCTCCACCTACAAAACCTACACAATGGAAAAGCCAAACAAAAGAAAATAAAGTTGGAACTTCTTTCCCTCATGAGTCCACATTTGGCGTTGGCAACTTTAATGCTTTTAAATCAACTGCCAAGAACTTTAGTCCATCTACAAATTCAGTGAAAGAGTGTAATCGCTCAAATTCCTCTTCTCCTGTTGACAAACTTAATCAGCAGCCTCGTCTAACCAAACTGACACGAATGCGCACTGATAAGAAGAGTGAATTTTTGAAAGCATTGAAAAGAGACAGAGTAGAAGAGGAACATGAAGATGAAAGCCGTGCTGGCTCAGAGAAGGATGACGACTCATTTAATTTACATAACAGCAATAGTACTCACCAAGAAAGGGATATAAACCGAAACTTCGATGAAAATGAAATTCCTCAAGAGAATGGCAATGCCTCAGTGATTTCCCAGCAGATCATTCGGTCTTCAACCTTCCCACAAACTGATGTTCTTTCAAGTTCACTTGAGGCAGAACACAGATTGTTAAAGGAAATGGGCTGGCAGGAAGACAGTGAAAATGATGAAACATGTGCTCCCTTAACTGAGGATGAAATGAGAGAATTCCAAGTTATTAGTGAACAGTTACAGAAGAATGGTCTGAGAAAAAATGGTATTTTGAAAAATGGCTTGATCTGTGACTTCAAGTTTGGACCGTGGAAGAACAGCACTTTCAAACCCACAACTGAGAATGATGACACAGAGACAAGTAGCAGTGATACATCAGATGACGACGATGTGTGA
Amino sequence
MAQHDFAPAWLNFPTPPSSTKSSLNFEKHSENFAWTENRYDVNRRRHNSSDGFDSAIGRPNGGNFGRKEKNGWRTHGRNGTENINHRGGYHGGSSRSRSSIFHAGKSQGLHENNIPDNETGRKEDKRERKQFEAEDFPSLNPEYEREPNHNKSLAAGVWGLHAQTHTYPTKKISQAPLLEYPPNPKSRAPRMLVIKKGNTKDLQLSGFPVVGNLPSQPVKNGTGPSVYKGLVPKPAAPPTKPTQWKSQTKENKVGTSFPHESTFGVGNFNAFKSTAKNFSPSTNSVKECNRSNSSSPVDKLNQQPRLTKLTRMRTDKKSEFLKALKRDRVEEEHEDESRAGSEKDDDSFNLHNSNSTHQERDINRNFDENEIPQENGNASVISQQIIRSSTFPQTDVLSSSLEAEHRLLKEMGWQEDSENDETCAPLTEDEMREFQVISEQLQKNGLRKNGILKNGLICDFKFGPWKNSTFKPTTENDDTETSSSDTSDDDDV*